RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 ATG4AQ8WYN0 398 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 MTMR12Q9C0I1 747 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 ROBO3Q96MS0 1386 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 WDR91A4D1P6 747 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 DMTNQ08495 405 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 DUOXA2Q1HG44 320 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 ANAPC5Q9UJX4 755 aa17.13■□□□□ 0.33
SYNM-201ENST00000328642 M0R2N6 131 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 ZNF263O14978 683 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 OATP04181 439 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 BRD2P25440 801 aaKnown RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 CEP57Q86XR8 500 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 PALM2Q8IXS6 379 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 KCTD6Q8NC69 237 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 SPATC1LQ9H0A9 340 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 ZNF446Q9NWS9 450 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 KLK14Q9P0G3 267 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 SAMD15Q9P1V8 674 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 F8VZ95 297 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 EIF3DO15371 548 aaKnown RBP eCLIP17.12■□□□□ 0.33
SYNM-201ENST00000328642 TGFB1I1O43294 461 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 ARPP19P56211 112 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 NOP14P78316 857 aaKnown RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 BBS9Q3SYG4 887 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 APTXQ7Z2E3 356 aaKnown RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 OPTNQ96CV9 577 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 GOLGA4Q13439 2230 aaKnown RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 DDX3XO00571 662 aaKnown RBP eCLIP17.12■□□□□ 0.33
SYNM-201ENST00000328642 RARBP10826 455 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 H2AFXP16104 143 aaPredicted RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 SAT1P21673 171 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 NLRP11P59045 1033 aaKnown RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 PSMC1P62191 440 aaKnown RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 RBBP8NLQ8NC74 664 aaPredicted RBP17.12■□□□□ 0.33
SYNM-201ENST00000328642 GDAP1Q8TB36 358 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 TLR10Q9BXR5 811 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 FUT8Q9BYC5 575 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 TXNDC16Q9P2K2 825 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
SYNM-201ENST00000328642 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 LDHAP00338 332 aaKnown RBP17.11■□□□□ 0.33
SYNM-201ENST00000328642 FDX1P10109 184 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 IFT88Q13099 833 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 KIZQ2M2Z5 673 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 B4GALNT4Q76KP1 1039 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
SYNM-201ENST00000328642 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 WRAP73Q9P2S5 460 aaPredicted RBP17.11■□□□□ 0.33
SYNM-201ENST00000328642 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 GRID2IPA4D2P6 1211 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 M0QYV0 167 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 ZNF286BP0CG31 522 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 PBX1P40424 430 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 TMEM35BQ8NCS4 154 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 CCNYQ8ND76 341 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 UBA3Q8TBC4 463 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
SYNM-201ENST00000328642 RNF14Q9UBS8 474 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 VAV3Q9UKW4 847 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 VGLL3A8MV65 326 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 ADORA2BP29275 332 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 YWHAGP61981 247 aaKnown RBP eCLIP17.11■□□□□ 0.33
SYNM-201ENST00000328642 MTMR3Q13615 1198 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 LLGL2Q6P1M3 1020 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 CCDC13Q8IYE1 715 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 RPS6KC1Q96S38 1066 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 SPC25Q9HBM1 224 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 OLFML3Q9NRN5 406 aa17.11■□□□□ 0.33
SYNM-201ENST00000328642 PRRC2BQ5JSZ5 2229 aaKnown RBP17.1■□□□□ 0.33
SYNM-201ENST00000328642 GLI1P08151 1106 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 NR1D1P20393 614 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 GUCY1A3Q02108 690 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 LRRC14Q15048 493 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 ZC3H18Q86VM9 953 aaKnown RBP17.1■□□□□ 0.33
SYNM-201ENST00000328642 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 FEZ2Q9UHY8 353 aaPredicted RBP17.1■□□□□ 0.33
SYNM-201ENST00000328642 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.1■□□□□ 0.33
SYNM-201ENST00000328642 NFKBIEO00221 500 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 CELF2O95319 508 aaKnown RBP17.1■□□□□ 0.33
SYNM-201ENST00000328642 STX2P32856 288 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 BEND6Q5SZJ8 279 aaPredicted RBP17.1■□□□□ 0.33
SYNM-201ENST00000328642 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
SYNM-201ENST00000328642 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 GPRC5DQ9NZD1 345 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 H3BQF6 201 aa17.1■□□□□ 0.33
SYNM-201ENST00000328642 SUPT20HL2P0C7V6 817 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms