RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ABLIM1O14639 778 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 CAND2O75155 1236 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 AKAP3O75969 853 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 CAPN2P17655 700 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 ARF4P18085 180 aaPredicted RBP20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 GARTP22102 1010 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 MYBPC2Q14324 1141 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 FAM26DQ5JW98 314 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 C1orf53Q5VUE5 145 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 NECAB2Q7Z6G3 386 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 FAM228AQ86W67 206 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 ZNF397Q8NF99 534 aaPredicted RBP20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 TMEM174Q8WUU8 243 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 SAAL1Q96ER3 474 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 EDEM3Q9BZQ6 932 aa20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 ARMCX3Q9UH62 379 aaPredicted RBP20.4■□□□□ 0.86
EXOSC3-201ENST00000327304 GOLGA8IPA6NC78 632 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 SOWAHDA6NJG2 315 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 GOLGA8JA6NMD2 632 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 TLR3O15455 904 aaKnown RBP20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 TOM1L1O75674 476 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 PROZP22891 400 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 LRRC26Q2I0M4 334 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 ZBTB33Q86T24 672 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 REXO1L1PQ8IX06 675 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 MKNK1Q9BUB5 465 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 PDZD7Q9H5P4 517 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 PTPRHQ9HD43 1115 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 TNFSF13BQ9Y275 285 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 ATP11BQ9Y2G3 1177 aa20.39■□□□□ 0.86
EXOSC3-201ENST00000327304 A0A0B4J269 797 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 EXOC3O60645 756 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 EPB41P11171 864 aaKnown RBP20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 HARSP12081 509 aaKnown RBP20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 MATR3P43243 847 aaKnown RBP eCLIP20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 KLK7P49862 253 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 MEA1Q16626 185 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 FBXO47Q5MNV8 452 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 RAD9BQ6WBX8 426 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 XXYLT1Q8NBI6 393 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 CAGE1Q8TC20 777 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 MSTO1Q9BUK6 570 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 PAXBP1Q9Y5B6 917 aa20.39■□□□□ 0.85
EXOSC3-201ENST00000327304 DCDC2CA8MYV0 355 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 CLDN3O15551 220 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 CCDC175P0C221 793 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 HOXA11P31270 313 aaPredicted RBP20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 FAAP100Q0VG06 881 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 SLFN12LQ6IEE8 588 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 MPZL3Q6UWV2 235 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 TOGARAM2Q6ZUX3 1019 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 TOX2Q96NM4 488 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 TCHPQ9BT92 498 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 AGPAT5Q9NUQ2 364 aa20.38■□□□□ 0.85
EXOSC3-201ENST00000327304 RPS6KA5O75582 802 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 GHRP10912 638 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 MCL1Q07820 350 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 LPIN1Q14693 890 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 MBTPS1Q14703 1052 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 PCBP1Q15365 356 aaKnown RBP eCLIP20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 ZNF568Q3ZCX4 644 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 ZBTB41Q5SVQ8 909 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 FAM186BQ8IYM0 893 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 CCDC155Q8N6L0 562 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 RDH13Q8NBN7 331 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 AGO3Q9H9G7 860 aaKnown RBP20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 AGO2Q9UKV8 859 aaKnown RBP20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 A0A1B0GUA9 196 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 ADRB2P07550 413 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 PSMC2P35998 433 aaKnown RBP20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 CDK17Q00537 523 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 KCNMA1Q12791 1236 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 BFSP2Q13515 415 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 UBE2Q1Q7Z7E8 422 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 CBWD2Q8IUF1 395 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 CDT1Q9H211 546 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 MMRN2Q9H8L6 949 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 ZNHIT6Q9NWK9 470 aaKnown RBP20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 ST3GAL5Q9UNP4 418 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 PIN4Q9Y237 131 aaKnown RBP20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 FRMD4BQ9Y2L6 1034 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 ADGRG1Q9Y653 693 aa20.37■□□□□ 0.85
EXOSC3-201ENST00000327304 UMODL1Q5DID0 1318 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 SELPP16109 830 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 HNRNPH3P31942 346 aaKnown RBP20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 KCNH2Q12809 1159 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 MTF1Q14872 753 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 SEZ6Q53EL9 994 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 LRRC8DQ7L1W4 858 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 GPD1LQ8N335 351 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 NEK11Q8NG66 645 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 BORCS6Q96GS4 357 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 FBXL18Q96ME1 805 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 FAM213AQ9BRX8 229 aa20.36■□□□□ 0.85
EXOSC3-201ENST00000327304 FAM189A1O60320 539 aa20.35■□□□□ 0.85
EXOSC3-201ENST00000327304 AFPP02771 609 aaKnown RBP20.35■□□□□ 0.85
EXOSC3-201ENST00000327304 CD52P31358 61 aa20.35■□□□□ 0.85
EXOSC3-201ENST00000327304 ACOT2P49753 483 aa20.35■□□□□ 0.85
EXOSC3-201ENST00000327304 NCBP1Q09161 790 aaKnown RBP20.35■□□□□ 0.85
EXOSC3-201ENST00000327304 SNRNP35Q16560 246 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms