RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 GPRC5DQ9NZD1 345 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 PGAP2Q9UHJ9 254 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 AGO2Q9UKV8 859 aaKnown RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 PCDHGC5Q9Y5F6 944 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 GOLGA6L10A6NI86 522 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 THAP12O43422 761 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 RAP1GAPP47736 663 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 ATP13A4Q4VNC1 1196 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 DCAF12L1Q5VU92 463 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 DPY19L2P1Q6NXN4 242 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 BCAS4Q8TDM0 211 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 LRRN4Q8WUT4 740 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 HNRNPLLQ8WVV9 542 aaKnown RBP11.45□□□□□ -0.58
CUL4A-201ENST00000326335 RPGRIP1Q96KN7 1286 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 APOL6Q9BWW8 343 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 EFCC1Q9HA90 598 aa11.45□□□□□ -0.58
CUL4A-201ENST00000326335 ZNF233A6NK53 670 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 B4GALT5O43286 388 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 MAP3K6O95382 1288 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 KCNA2P16389 499 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 RRM1P23921 792 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 MCM3P25205 808 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 JAK3P52333 1124 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 ZNF131P52739 623 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 JAM2P57087 298 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 PLCB3Q01970 1234 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 SMAD1Q15797 465 aaKnown RBP11.44□□□□□ -0.58
CUL4A-201ENST00000326335 BMT2Q1RMZ1 405 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 EPS8L1Q8TE68 723 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 LMBR1Q8WVP7 490 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 PRPF31Q8WWY3 499 aaKnown RBP11.44□□□□□ -0.58
CUL4A-201ENST00000326335 IQCDQ96DY2 449 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 SELENOSQ9BQE4 189 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■■□□□ 14.1
CUL4A-201ENST00000326335 EDEM3Q9BZQ6 932 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 AZI2Q9H6S1 392 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 FAM53CQ9NYF3 392 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 TTC7AQ9ULT0 858 aaPredicted RBP11.44□□□□□ -0.58
CUL4A-201ENST00000326335 DOCK5Q9H7D0 1870 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 DCDC2CA8MYV0 355 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 LCA5LO95447 670 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 EDN1P05305 212 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 PYGMP11217 842 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 CYP11B1P15538 503 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 TTMPQ5BVD1 217 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 CYP4A22Q5TCH4 519 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 MIS18BP1Q6P0N0 1132 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 MMGT1Q8N4V1 131 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 MTMR12Q9C0I1 747 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 TXNRD2Q9NNW7 524 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 EXOC7Q9UPT5 735 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 LRRC37AA6NMS7 1700 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 HLA-DRAP01903 254 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 POTEJP0CG39 1038 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 UBA1P22314 1058 aaKnown RBP11.44□□□□□ -0.58
CUL4A-201ENST00000326335 MAPK4P31152 587 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 IFNAR2P48551 515 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 MFAP3P55082 362 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 TGFB2P61812 414 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 CCDC33Q8N5R6 958 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 GOLGA5Q8TBA6 731 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 ASIC3Q9UHC3 531 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 TBK1Q9UHD2 729 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 UTP11Q9Y3A2 253 aaKnown RBP11.44□□□□□ -0.58
CUL4A-201ENST00000326335 AFG3L2Q9Y4W6 797 aa11.44□□□□□ -0.58
CUL4A-201ENST00000326335 ARIH2O95376 493 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 ACSL3O95573 720 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 STAT5BP51692 787 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 C4orf19Q8IY42 314 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 LRRC57Q8N9N7 239 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 MDM1Q8TC05 714 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 AENQ8WTP8 325 aaKnown RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 ZNF516Q92618 1163 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 SYN2Q92777 582 aaPredicted RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 HOXC10Q9NYD6 342 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 USP2O75604 605 aaPredicted RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 IFNB1P01574 187 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 CCDC172P0C7W6 258 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 ATP4AP20648 1035 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 CDH8P55286 799 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 IRX5P78411 483 aaPredicted RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 DR1Q01658 176 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 SMTNL2Q2TAL5 461 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 BRDTQ58F21 947 aaPredicted RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 MMS22LQ6ZRQ5 1243 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 FAM49AQ9H0Q0 323 aaPredicted RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 DMAC2Q9NW81 257 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 NOVA2Q9UNW9 492 aaKnown RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 GPC5P78333 572 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 FKBP1CQ5VVH2 108 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
CUL4A-201ENST00000326335 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 GPD1LQ8N335 351 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 STK24Q9Y6E0 443 aa11.43□□□□□ -0.58
CUL4A-201ENST00000326335 CST3P01034 146 aaPredicted RBP11.42□□□□□ -0.58
CUL4A-201ENST00000326335 KRT10P13645 584 aa11.42□□□□□ -0.58
CUL4A-201ENST00000326335 GLRA2P23416 452 aa11.42□□□□□ -0.58
CUL4A-201ENST00000326335 SUPT20HL1Q3ZLR7 823 aa11.42□□□□□ -0.58
CUL4A-201ENST00000326335 RNF187Q5TA31 235 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms