RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CHUKO15111 745 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 PLS3P13797 630 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 HSPA6P17066 643 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 NSFP46459 744 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 SLMAPQ14BN4 828 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 ARHGEF16Q5VV41 709 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 PARP9Q8IXQ6 854 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 FAM129AQ9BZQ8 928 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 GPR88Q9GZN0 384 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 EXOC7Q9UPT5 735 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 TCHPQ9BT92 498 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 CDC42EP4Q9H3Q1 356 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.8□□□□□ -0.2
HMGCS1-201ENST00000325110 RREB1Q92766 1687 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 NEFHP12036 1026 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 CYP11B1P15538 503 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 CREB1P16220 341 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 CD58P19256 250 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 CNGA1P29973 690 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 TMED2Q15363 201 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 TMEM132AQ24JP5 1023 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 WDR44Q5JSH3 913 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 NLRX1Q86UT6 975 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 KIF2BQ8N4N8 673 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 RMDN3Q96TC7 470 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 ZNF277Q9NRM2 450 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 CHST7Q9NS84 486 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 NKIRAS1Q9NYS0 192 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 SEPT9Q9UHD8 586 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 TMEM120BA0PK00 339 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 SCP2P22307 547 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 KIF22Q14807 665 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 FBXL13Q8NEE6 735 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 KREMEN1Q96MU8 473 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 TAAR1Q96RJ0 339 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 PFASO15067 1338 aa13.79□□□□□ -0.2
HMGCS1-201ENST00000325110 GJB6O95452 261 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 BRAFP15056 766 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 DRD4P21917 467 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 CTNNA2P26232 953 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 UGCGQ16739 394 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ZDHHC24Q6UX98 284 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 USP37Q86T82 979 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 RUNDC3BQ96NL0 473 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 FIZ1Q96SL8 496 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 RIPK2O43353 540 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ENTPD3O75355 529 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 VIL1P09327 827 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ACOT2P49753 483 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 CLUL1Q15846 466 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 MTERF2Q49AM1 385 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ARMC9Q7Z3E5 817 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ZDHHC18Q9NUE0 388 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 HERC5Q9UII4 1024 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 CCT8L1PA6NM43 557 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 KRT15P19012 456 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 RRM1P23921 792 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 FNTAP49354 379 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 LIG4P49917 911 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ERMARDQ5T6L9 678 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 KIRREL3Q8IZU9 778 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ACSF2Q96CM8 615 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 MYCBPQ99417 103 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 DMAC2Q9NW81 257 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 ZNF70Q9UC06 446 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-201ENST00000325110 PIK3CAP42336 1068 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 ITGA8P53708 1063 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 SEPT7Q16181 437 aaKnown RBP13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 TKFCQ3LXA3 575 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 SEZ6Q53EL9 994 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 FUKQ8N0W3 1084 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 VPS37BQ9H9H4 285 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 GRHL1Q9NZI5 618 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 GABBR1Q9UBS5 961 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 ZNF148Q9UQR1 794 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 RPTORQ8N122 1335 aa13.77□□□□□ -0.2
HMGCS1-201ENST00000325110 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 PIK3CDO00329 1044 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 ATP9AO75110 1047 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 SPAG7O75391 227 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 AGTP01019 485 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 CHKAP35790 457 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 CETN2P41208 172 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms