RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 DNM1LO00429 736 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 PES1O00541 588 aaKnown RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 B4GALT5O43286 388 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 TSPAN1O60635 241 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 GYPCP04921 128 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 DARSP14868 501 aaKnown RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 CRYBB1P53674 252 aaPredicted RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 CLDN10P78369 228 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 CYP24A1Q07973 514 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 DCAF17Q5H9S7 520 aaPredicted RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 ICE2Q659A1 982 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 PLEKHO2Q8TD55 490 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 ZNF592Q92610 1267 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 PPP1R16BQ96T49 567 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 FAM213AQ9BRX8 229 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 MSTO1Q9BUK6 570 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 TTYH3Q9C0H2 523 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 ANKFY1Q9P2R3 1169 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 OGDHLQ9ULD0 1010 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 A0A1B0GUA9 196 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 A0A1W2PQJ5 194 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 OGTO15294 1046 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 P4HA2O15460 535 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 CCL5P13501 91 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 ARF4P18085 180 aaPredicted RBP13.83□□□□□ -0.2
DDX39A-202ENST00000324340 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
DDX39A-202ENST00000324340 FMO5P49326 533 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 DLG4P78352 724 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 POU5F1Q01860 360 aaKnown RBP13.83□□□□□ -0.2
DDX39A-202ENST00000324340 RBL2Q08999 1139 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 TMEM62Q0P6H9 643 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 SNX17Q15036 470 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 MTFR1Q15390 333 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 FAM47CQ5HY64 1035 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 TCERG1LQ5VWI1 586 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 FBXO46Q6PJ61 603 aaPredicted RBP13.83□□□□□ -0.2
DDX39A-202ENST00000324340 USP37Q86T82 979 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 RSPH3Q86UC2 560 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 TC2NQ8N9U0 490 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 UBXN4Q92575 508 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 SCLT1Q96NL6 688 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 OSMRQ99650 979 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
DDX39A-202ENST00000324340 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 DNAI1Q9UI46 699 aa13.83□□□□□ -0.2
DDX39A-202ENST00000324340 KBTBD13C9JR72 458 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 MYO1CO00159 1063 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 STX10O60499 249 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 N4BP1O75113 896 aaKnown RBP13.82□□□□□ -0.2
DDX39A-202ENST00000324340 CSDE1O75534 798 aaKnown RBP13.82□□□□□ -0.2
DDX39A-202ENST00000324340 ERLIN2O94905 339 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 TRIM49P0CI25 452 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 TRIM49CP0CI26 452 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 MCF2P10911 925 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 AXLP30530 894 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 GTF2H1P32780 548 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 KLK7P49862 253 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 MRPS6P82932 125 aaKnown RBP13.82□□□□□ -0.2
DDX39A-202ENST00000324340 PTK7Q13308 1070 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 ARID5BQ14865 1188 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 PSMD6Q15008 389 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 PKN2Q16513 984 aaKnown RBP13.82□□□□□ -0.2
DDX39A-202ENST00000324340 PTGISQ16647 500 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 EEF1DP3Q658K8 133 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 DPY19L2P1Q6NXN4 242 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 PPFIBP1Q86W92 1011 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 TMEM40Q8WWA1 233 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 WNT8BQ93098 351 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 TCHPQ9BT92 498 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 EDEM3Q9BZQ6 932 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 CDT1Q9H211 546 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 PLCB1Q9NQ66 1216 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 RSPH14Q9UHP6 348 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 CPSF3Q9UKF6 684 aaKnown RBP13.82□□□□□ -0.2
DDX39A-202ENST00000324340 CAPN11Q9UMQ6 739 aa13.82□□□□□ -0.2
DDX39A-202ENST00000324340 GOLGA6L9A6NEM1 432 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 AKR1B15C9JRZ8 316 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-202ENST00000324340 M0QZ92 97 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 MFAP3LO75121 409 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 CAND2O75155 1236 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 HOXA11P31270 313 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-202ENST00000324340 CASP14P31944 242 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 MATR3P43243 847 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ACOT2P49753 483 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 FXR1P51114 621 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ETF1P62495 437 aaKnown RBP13.81□□□□□ -0.2
DDX39A-202ENST00000324340 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 MGAT3Q09327 533 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 TRIM71Q2Q1W2 868 aaKnown RBP13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ZNF568Q3ZCX4 644 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ARHGAP29Q52LW3 1261 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms