RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 C7orf25Q9BPX7 421 aa16.94■□□□□ 0.3
TSFM-201ENST00000323833 PYM1Q9BRP8 204 aaKnown RBP16.94■□□□□ 0.3
TSFM-201ENST00000323833 ST6GALNAC4Q9H4F1 302 aa16.94■□□□□ 0.3
TSFM-201ENST00000323833 FAM237AA0A1B0GTK4 181 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 HNRNPDLO14979 420 aaKnown RBP16.93■□□□□ 0.3
TSFM-201ENST00000323833 PPP1R37O75864 691 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 GALTP07902 379 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 SLFN14P0C7P3 912 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 MYBP10242 640 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 SCP2P22307 547 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 MATR3P43243 847 aaKnown RBP eCLIP16.93■□□□□ 0.3
TSFM-201ENST00000323833 SYKP43405 635 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 SLC11A1P49279 550 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 ALDH7A1P49419 539 aaKnown RBP16.93■□□□□ 0.3
TSFM-201ENST00000323833 LIG4P49917 911 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 CASP5P51878 434 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 CUL4BQ13620 913 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 CSPP1Q1MSJ5 1256 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 SEZ6Q53EL9 994 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 TMEM173Q86WV6 379 aaPredicted RBP16.93■□□□□ 0.3
TSFM-201ENST00000323833 MAP4K3Q8IVH8 894 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 SLC39A11Q8N1S5 342 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 SLC17A8Q8NDX2 589 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 MRPS27Q92552 414 aaKnown RBP16.93■□□□□ 0.3
TSFM-201ENST00000323833 HPS3Q969F9 1004 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 RPS6KC1Q96S38 1066 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 STRA6Q9BX79 667 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 LMAN2LQ9H0V9 348 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 IKZF4Q9H2S9 585 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 OLFML3Q9NRN5 406 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 SPG21Q9NZD8 308 aa16.93■□□□□ 0.3
TSFM-201ENST00000323833 ZMYM2Q9UBW7 1377 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 PTGESO14684 152 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 CLDN3O15551 220 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 GCNT3O95395 438 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 PIGRP01833 764 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 IRS1P35568 1242 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 GRM5P41594 1212 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 PLCB3Q01970 1234 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 KCNA1Q09470 495 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
TSFM-201ENST00000323833 CNNM4Q6P4Q7 775 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 SLC39A4Q6P5W5 647 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 COLGALT2Q8IYK4 626 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 BCL7CQ8WUZ0 217 aaPredicted RBP16.92■□□□□ 0.3
TSFM-201ENST00000323833 PAGE5Q96GU1 130 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 CCDC94Q9BW85 323 aaPredicted RBP16.92■□□□□ 0.3
TSFM-201ENST00000323833 PRDM6Q9NQX0 595 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 CHMP5Q9NZZ3 219 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 PCDHGC5Q9Y5F6 944 aa16.92■□□□□ 0.3
TSFM-201ENST00000323833 TISP43B9A030 160 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 ANKRD63C9JTQ0 380 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 ABCD1P33897 745 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 PPM1AP35813 382 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 ERVFC1P60507 584 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 MCL1Q07820 350 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 DSC1Q08554 894 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 GRIK3Q13003 919 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 GLIS3Q8NEA6 775 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 TMEM175Q9BSA9 504 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 CACNG4Q9UBN1 327 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 PRUNE2Q8WUY3 3088 aa16.91■□□□□ 0.3
TSFM-201ENST00000323833 BRWD1Q9NSI6 2320 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 GOLGA6L4A6NEF3 574 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 NRP1O14786 923 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 PRPF6O94906 941 aaKnown RBP16.9■□□□□ 0.3
TSFM-201ENST00000323833 ALDH2P05091 517 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 OR1G1P47890 313 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 YARSP54577 528 aaKnown RBP16.9■□□□□ 0.3
TSFM-201ENST00000323833 KRT17Q04695 432 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 UBE3AQ05086 875 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 SKIV2LQ15477 1246 aaKnown RBP16.9■□□□□ 0.3
TSFM-201ENST00000323833 TIGD5Q53EQ6 642 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 TCEAL5Q5H9L2 206 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 GLRA4Q5JXX5 417 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
TSFM-201ENST00000323833 UNC13DQ70J99 1090 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 HVCN1Q96D96 273 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 TMEM169Q96HH4 297 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 IGSF21Q96ID5 467 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 ACCSQ96QU6 501 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 NSUN3Q9H649 340 aaKnown RBP16.9■□□□□ 0.3
TSFM-201ENST00000323833 TLR9Q9NR96 1032 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 PRG3Q9Y2Y8 225 aaPredicted RBP16.9■□□□□ 0.3
TSFM-201ENST00000323833 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
TSFM-201ENST00000323833 F8W810 466 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 MEFVO15553 781 aaPredicted RBP16.89■□□□□ 0.29
TSFM-201ENST00000323833 ZNF202O95125 648 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 THP07101 528 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 PRR29P0C7W0 189 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 TNFSF9P41273 254 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 NAB2Q15742 525 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 ZBTB41Q5SVQ8 909 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 ALKAL1Q6UXT8 129 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 KRBA2Q6ZNG9 492 aa16.89■□□□□ 0.29
TSFM-201ENST00000323833 MICAL1Q8TDZ2 1067 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms