RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 GSC2O15499 205 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 CDH16O75309 829 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 PYGMP11217 842 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 FGFR1P11362 822 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 CCDC142Q17RM4 750 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 PALB2Q86YC2 1186 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 SLC13A5Q86YT5 568 aaPredicted RBP8.34□□□□□ -1.08
CD46-201ENST00000322875 RHOT2Q8IXI1 618 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 RBM17Q96I25 401 aaKnown RBP8.34□□□□□ -1.08
CD46-201ENST00000322875 MXD3Q9BW11 206 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 RAB34Q9BZG1 259 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 VCX3BQ9H321 246 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 VCX3AQ9NNX9 186 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 SLCO1B3Q9NPD5 702 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 UBN1Q9NPG3 1134 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 NKIRAS1Q9NYS0 192 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 TBC1D7Q9P0N9 293 aa8.34□□□□□ -1.08
CD46-201ENST00000322875 NPHP3-ACAD11A0A0J9YXS1 232 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 PDXKO00764 312 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 CDK7P50613 346 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 SLC12A3P55017 1021 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 DNAJC3Q13217 504 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 KIF22Q14807 665 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 LIN52Q52LA3 116 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 C12orf60Q5U649 245 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 TRABD2AQ86V40 505 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 RIBC1Q8N443 379 aaPredicted RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 ZNF276Q8N554 614 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 POP1Q99575 1024 aaKnown RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 TMEM47Q9BQJ4 181 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 BTBD10Q9BSF8 475 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 ASCC2Q9H1I8 757 aaPredicted RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 SYNCQ9H7C4 482 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 DNAJC18Q9H819 358 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 GCNT4Q9P109 453 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 ASTN1O14525 1302 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 KLRF2D3W0D1 207 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 PABPC4LP0CB38 370 aaKnown RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 RTP1P59025 263 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 MTA1Q13330 715 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 PTK6Q13882 451 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 HNRNPDQ14103 355 aaKnown RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 TNIP1Q15025 636 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 KYNUQ16719 465 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 KNOP1Q1ED39 458 aaKnown RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 ZNF449Q6P9G9 518 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 ZC3H18Q86VM9 953 aaKnown RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 UBL4BQ8N7F7 174 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 MORC4Q8TE76 937 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 SLX1AQ9BQ83 275 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 BIN2Q9UBW5 565 aaPredicted RBP8.33□□□□□ -1.08
CD46-201ENST00000322875 CIDEBQ9UHD4 219 aa8.33□□□□□ -1.08
CD46-201ENST00000322875 ZMYM2Q9UBW7 1377 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CAPN9O14815 690 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 SORBS3O60504 671 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 DNAJC6O75061 913 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 ABHD2P08910 425 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CRABP2P29373 138 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 NOVP48745 357 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 SCNN1BP51168 640 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CDR2Q01850 454 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 MECOMQ03112 1051 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 TDRPQ86YL5 185 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 SRRM1Q8IYB3 904 aaKnown RBP8.32□□□□□ -1.08
CD46-201ENST00000322875 ANKRD35Q8N283 1001 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 WDR60Q8WVS4 1066 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 GBP5Q96PP8 586 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 TUBGCP5Q96RT8 1024 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
CD46-201ENST00000322875 WNT8AQ9H1J5 351 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 IL1RAPL1Q9NZN1 696 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 G3BP2Q9UN86 482 aaKnown RBP8.32□□□□□ -1.08
CD46-201ENST00000322875 COL24A1Q17RW2 1714 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 NAV1Q8NEY1 1877 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 SPATA31A5Q5VU36 1347 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 SPATA31A7Q8IWB4 1347 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 KDM3AQ9Y4C1 1321 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 WTIPA6NIX2 430 aaPredicted RBP8.32□□□□□ -1.08
CD46-201ENST00000322875 E9PMD0 336 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 FSCN2O14926 492 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 EXOC3O60645 756 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CCDC22O60826 627 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 ECEL1O95672 775 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 PLA2G4BP0C869 781 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
CD46-201ENST00000322875 ABCB4P21439 1286 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 GYG1P46976 350 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 KCNJ1P48048 391 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 CLK2P49760 499 aaKnown RBP8.32□□□□□ -1.08
CD46-201ENST00000322875 NEK3P51956 506 aa8.32□□□□□ -1.08
CD46-201ENST00000322875 GRM2Q14416 872 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms