RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 FOXP3Q9BZS1 431 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 A0A0G2JPF8 293 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 PNMA6FA0A0J9YX94 578 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 HNRNPCL3B7ZW38 293 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 HNRNPCL4P0DMR1 293 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 MESDQ14696 234 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 ZBTB9Q96C00 473 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 FAF2Q96CS3 445 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 AP1S3Q96PC3 154 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 APOBEC2Q9Y235 224 aaKnown RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 PNMA6AP0CW24 399 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 LGALS3BPQ08380 585 aa10.25□□□□□ -0.77
COL12A1-201ENST00000322507 AGGF1Q8N302 714 aaeCLIP10.25□□□□□ -0.77
COL12A1-201ENST00000322507 EPC2Q52LR7 807 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 C19orf18Q8NEA5 215 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 DISP1Q96F81 1524 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 SETBP1Q9Y6X0 1596 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 POC1B-GALNT4F8VUJ3 575 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 TAF5LO75529 589 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 KCNA1Q09470 495 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 FAM133AQ8N9E0 248 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 TIPINQ9BVW5 301 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 CEP72Q9P209 647 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 UVRAGQ9P2Y5 699 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ZCCHC11Q5TAX3 1644 aaKnown RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 POTEMA6NI47 508 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ZBED1O96006 694 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 PECAM1P16284 738 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 RBM20Q5T481 1227 aaKnown RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 POTEHQ6S545 545 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 POTEGQ6S5H5 508 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 DGKHQ86XP1 1220 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 CCDC127Q96BQ5 260 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ZNF594Q96JF6 807 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 L3MBTL1Q9Y468 752 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ALAS1P13196 640 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 PLS3P13797 630 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 CLK1P49759 484 aaKnown RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 TFDP2Q14188 446 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 TBC1D9BQ66K14 1250 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 DARS2Q6PI48 645 aaKnown RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 FBXO40Q9UH90 709 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 WDR37Q9Y2I8 494 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 KLHL18O94889 574 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 BTDP43251 543 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 MAML1Q92585 1016 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 SPRTNQ9H040 489 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 HMG20AQ9NP66 347 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 C8orf4Q9NR00 106 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 DDX56Q9NY93 547 aaKnown RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ERAP1Q9NZ08 941 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 SKAP2O75563 359 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ZNF806P0C7X5 589 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 CDC42EP1Q00587 391 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 LINC00301Q8NCQ3 95 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 KATNAL1Q9BW62 490 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 RNF103-CHMP3A0A140T963 221 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 NNTQ13423 1086 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 MSANTD3Q96H12 275 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 RNPEPQ9H4A4 650 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 EML4Q9HC35 981 aaKnown RBP10.24□□□□□ -0.77
COL12A1-201ENST00000322507 MLXQ9UH92 298 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 KRT1P04264 644 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 PHKG2P15735 406 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ZNF280BQ86YH2 543 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 SH3TC2Q8TF17 1288 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 RAD18Q9NS91 495 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 TNFRSF21O75509 655 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 PLEKHA7Q6IQ23 1121 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 RAPGEF5Q92565 580 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 LMCD1Q9NZU5 365 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 ARAP3Q8WWN8 1544 aa10.24□□□□□ -0.77
COL12A1-201ENST00000322507 BTBD18B2RXH4 712 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 CENPXA8MT69 81 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 FGFR2P21802 821 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 C2CD6Q53TS8 623 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 TCP11X2Q5H9J9 407 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 ITPRIPL1Q6GPH6 555 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 PCDHA5Q9Y5H7 936 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 PIK3R2O00459 728 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 OCRLQ01968 901 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 TCP10Q12799 353 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 NAALADL2Q58DX5 795 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 GPT2Q8TD30 523 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 CCDC22O60826 627 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 RPL19P84098 196 aaKnown RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 DLG1Q12959 904 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 CLEC4GQ6UXB4 293 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SLITRK6Q9H5Y7 841 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 RPF1Q9H9Y2 349 aaKnown RBP10.23□□□□□ -0.77
COL12A1-201ENST00000322507 SMYD2Q9NRG4 433 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 BAIAP2Q9UQB8 552 aa10.23□□□□□ -0.77
COL12A1-201ENST00000322507 PCDHA13Q9Y5I0 950 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms