RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 THOC7Q6I9Y2 204 aaKnown RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 POTEBQ6S5H4 581 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF564Q8TBZ8 553 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 SCG3Q8WXD2 468 aaKnown RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 DPF2Q92785 391 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 PPP2R3CQ969Q6 453 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 MANSC1Q9H8J5 431 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 KPNA7A9QM74 516 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 H7C0C1 242 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 BACH1O14867 736 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 PDE8AO60658 829 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 EIF2S1P05198 315 aaKnown RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 KCNA2P16389 499 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 PTPN4P29074 926 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 ATP5OP48047 213 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 PTDSS1P48651 473 aaKnown RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 KCNH2Q12809 1159 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 EFTUD2Q15029 972 aaKnown RBP eCLIP7.46□□□□□ -1.223e-6■■■■■ 32.7
SMC1A-201ENST00000322213 TBC1D9BQ66K14 1250 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 ACTRT1Q8TDG2 376 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 POMGNT1Q8WZA1 660 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 MTBPQ96DY7 904 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 HAO1Q9UJM8 370 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 DBR1Q9UK59 544 aaKnown RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 MYO16Q9Y6X6 1858 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 C16orf96A6NNT2 1141 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 SKIV2L2P42285 1042 aaKnown RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 KRT26Q7Z3Y9 468 aa7.46□□□□□ -1.22
SMC1A-201ENST00000322213 PROSER2Q86WR7 435 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 MTCL1Q9Y4B5 1905 aaKnown RBP7.46□□□□□ -1.22
SMC1A-201ENST00000322213 KLRF2D3W0D1 207 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CCDC166P0CW27 439 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 S100A1P23297 94 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 SOX5P35711 763 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 OCRLQ01968 901 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 PDIA2Q13087 525 aaKnown RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 RFX6Q8HWS3 928 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 GIPC2Q8TF65 315 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 BEGAINQ9BUH8 593 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CCDC28BQ9BUN5 200 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 MRPS26Q9BYN8 205 aaKnown RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 KLHL25Q9H0H3 589 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 PRDM16Q9HAZ2 1276 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 GALNT8Q9NY28 637 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CYP39A1Q9NYL5 469 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TM9SF1O15321 606 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 WFS1O76024 890 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 KIF19Q2TAC6 998 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 FRMD5Q7Z6J6 570 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 FAM89AQ96GI7 184 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ZWILCHQ9H900 591 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CACNA1DQ01668 2161 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ESYT2A0FGR8 921 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 KIF28PB7ZC32 967 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ITIH2P19823 946 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 KCNMA1Q12791 1236 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 KRT72Q14CN4 511 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 DNAJC24Q6P3W2 148 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 IZUMO2Q6UXV1 221 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CYFIP1Q7L576 1253 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 POLD4Q9HCU8 107 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 KRT82Q9NSB4 513 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 SESN1Q9Y6P5 492 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 NUP188Q5SRE5 1749 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 KPNA4O00629 521 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 LCA5LO95447 670 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ODR4Q5SWX8 454 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 WLSQ5T9L3 541 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TMC5Q6UXY8 1006 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ADNPQ9H2P0 1102 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TMOD4Q9NZQ9 345 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 PRELID1Q9Y255 219 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ASPRV1Q53RT3 343 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 EIF1ADQ8N9N8 165 aaKnown RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 SAP30BPQ9UHR5 308 aaKnown RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TBKBP1A7MCY6 615 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CALB1P05937 261 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 SLC1A1P43005 524 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 USP11P51784 963 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF844Q08AG5 666 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TRIM60Q495X7 471 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 FBXL13Q8NEE6 735 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 INPP5DQ92835 1189 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 AIFM3Q96NN9 605 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TMEM206Q9H813 350 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 EML4Q9HC35 981 aaKnown RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 AGPAT5Q9NUQ2 364 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 FBXO2Q9UK22 296 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 AFF2P51816 1311 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 SAT1P21673 171 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 BLVRAP53004 296 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TTC33Q6PID6 262 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TMC3Q7Z5M5 1100 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 CDR2LQ86X02 465 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-201ENST00000322213 TTC13Q8NBP0 860 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 OR2W6PQ8NHA6 318 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 PLEKHG4BQ96PX9 1271 aa7.45□□□□□ -1.22
SMC1A-201ENST00000322213 SYBUQ9NX95 663 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms