RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 TMEM266Q2M3C6 531 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 FAM26FQ5R3K3 315 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 RINLQ6ZS11 566 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 TSHZ1Q6ZSZ6 1077 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 RFX8Q6ZV50 586 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 OTOAQ7RTW8 1153 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 SATL1Q86VE3 508 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 VPS36Q86VN1 386 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 ST13P4Q8IZP2 240 aaPredicted RBP8.48□□□□□ -1.05
RTL3-201ENST00000321110 PRR11Q96HE9 360 aaPredicted RBP8.48□□□□□ -1.05
RTL3-201ENST00000321110 TAOK3Q9H2K8 898 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 EURLQ9NYK6 297 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 IL1RAPL1Q9NZN1 696 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 HDAC9Q9UKV0 1011 aa8.48□□□□□ -1.05
RTL3-201ENST00000321110 PLCH1Q4KWH8 1693 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 RASA4BC9J798 803 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 C2CD2LO14523 706 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 MAGEB3O15480 346 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 GYG2O15488 501 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 RASA4O43374 803 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 ATP9BO43861 1147 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 HNRNPCL1O60812 293 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 SUPT3HO75486 399 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 HARSP12081 509 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 ZNF24P17028 368 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 DSG1Q02413 1049 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CDC16Q13042 620 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 R3HDM1Q15032 1099 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
RTL3-201ENST00000321110 TCERG1LQ5VWI1 586 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 TBC1D9BQ66K14 1250 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 RGS9BPQ6ZS82 235 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 SCYL3Q8IZE3 742 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 FNBP1Q96RU3 617 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 TSPAN18Q96SJ8 248 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 THAP2Q9H0W7 228 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 KCTD10Q9H3F6 313 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 EBF3Q9H4W6 596 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 NPHS2Q9NP85 383 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 TAS2R14Q9NYV8 317 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 NINJ2Q9NZG7 142 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 LRP2BPQ9P2M1 347 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.47□□□□□ -1.05
RTL3-201ENST00000321110 ACTL7BQ9Y614 415 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 ALG6Q9Y672 507 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 SYNGAP1Q96PV0 1343 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 MAGEB6P1A0A0J9YX57 407 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CFAP69A5D8W1 941 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 POTEMA6NI47 508 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CYTH3O43739 400 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CDH16O75309 829 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 HSPA6P17066 643 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 BCAMP50895 628 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 SH3BGRP55822 239 aaPredicted RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 CTSWP56202 376 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 DYNLL1P63167 89 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 CALCOCO2Q13137 446 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 TRIM28Q13263 835 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 SIX1Q15475 284 aaPredicted RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 ECM1Q16610 540 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 PDK4Q16654 411 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CYP1B1Q16678 543 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CFAP157Q5JU67 520 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 ZNF554Q86TJ5 538 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 PALB2Q86YC2 1186 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 ZC3H3Q8IXZ2 948 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 RNF168Q8IYW5 571 aaPredicted RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 NME8Q8N427 588 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 SCFD1Q8WVM8 642 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CTNNBL1Q8WYA6 563 aaPredicted RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 MAML1Q92585 1016 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 MCUR1Q96AQ8 359 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 CDK5RAP3Q96JB5 506 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 RIOK1Q9BRS2 568 aaKnown RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 INIPQ9NRY2 104 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 TAS2R1Q9NYW7 299 aa8.47□□□□□ -1.05
RTL3-201ENST00000321110 ZNF330Q9Y3S2 320 aaPredicted RBP8.47□□□□□ -1.05
RTL3-201ENST00000321110 RREB1Q92766 1687 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 THAP12O43422 761 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 ZNF862O60290 1169 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 OPHN1O60890 802 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 VIL1P09327 827 aaKnown RBP8.46□□□□□ -1.05
RTL3-201ENST00000321110 ANPEPP15144 967 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 CRABP2P29373 138 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 GALK1P51570 392 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 EMP3P54852 163 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 MAP3K10Q02779 954 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 TMED2Q15363 201 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 EPHA7Q15375 998 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 CHRNA2Q15822 529 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 CLUL1Q15846 466 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 ARMCX6Q7L4S7 300 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 VPS52Q8N1B4 723 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 ANKRD35Q8N283 1001 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.05
RTL3-201ENST00000321110 SMYD1Q8NB12 490 aa8.46□□□□□ -1.05
RTL3-201ENST00000321110 RFWD2Q8NHY2 731 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms