RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ARHGEF19Q8IW93 802 aa19.29■□□□□ 0.68
RAB39A-201ENST00000320578 SLC30A5Q8TAD4 765 aa19.29■□□□□ 0.68
RAB39A-201ENST00000320578 POP1Q99575 1024 aaKnown RBP19.29■□□□□ 0.68
RAB39A-201ENST00000320578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.29■□□□□ 0.68
RAB39A-201ENST00000320578 IFT122Q9HBG6 1241 aa19.29■□□□□ 0.68
RAB39A-201ENST00000320578 ANKFY1Q9P2R3 1169 aa19.29■□□□□ 0.68
RAB39A-201ENST00000320578 NAGPAQ9UK23 515 aa19.29■□□□□ 0.68
RAB39A-201ENST00000320578 FOXN3O00409 490 aaPredicted RBP19.28■□□□□ 0.68
RAB39A-201ENST00000320578 TACC1O75410 805 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 CYP2B6P20813 491 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 MATR3P43243 847 aaKnown RBP eCLIP19.28■□□□□ 0.68
RAB39A-201ENST00000320578 ACOT2P49753 483 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 CPT1AP50416 773 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 IGBP1P78318 339 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 GCNT1Q02742 428 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 PRPF4BQ13523 1007 aaKnown RBP19.28■□□□□ 0.68
RAB39A-201ENST00000320578 MARCH8Q5T0T0 291 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 TLK2Q86UE8 772 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 ZNF410Q86VK4 478 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 HELQQ8TDG4 1101 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 TAS1R2Q8TE23 839 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 SHC3Q92529 594 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 ZNF516Q92618 1163 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 NLRP4Q96MN2 994 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 CDC23Q9UJX2 597 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 NRCAMQ92823 1304 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 FCGRTP55899 365 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 PRAMEF19Q5SWL8 479 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 ATF7IP2Q5U623 682 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 PAPD7Q5XG87 772 aaKnown RBP19.28■□□□□ 0.68
RAB39A-201ENST00000320578 FAM71AQ8IYT1 594 aa19.28■□□□□ 0.68
RAB39A-201ENST00000320578 TOPORSQ9NS56 1045 aaPredicted RBP19.28■□□□□ 0.68
RAB39A-201ENST00000320578 CPSF3Q9UKF6 684 aaKnown RBP19.28■□□□□ 0.68
RAB39A-201ENST00000320578 INO80B-WBP1J3KQ70 363 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 ZEB2O60315 1214 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 TNNI1P19237 187 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 CYP2C19P33261 490 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 NOGQ13253 232 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 CCL14Q16627 93 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 KYAT1Q16773 422 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 ALKBH5Q6P6C2 394 aaKnown RBP19.27■□□□□ 0.68
RAB39A-201ENST00000320578 TCHPQ9BT92 498 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 INO80BQ9C086 356 aaPredicted RBP19.27■□□□□ 0.68
RAB39A-201ENST00000320578 PDE11AQ9HCR9 933 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 DUSP10Q9Y6W6 482 aa19.27■□□□□ 0.68
RAB39A-201ENST00000320578 TTLL13PA6NNM8 815 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 HAS3O00219 553 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 DDX3XO00571 662 aaKnown RBP eCLIP19.26■□□□□ 0.67
RAB39A-201ENST00000320578 AMPD2Q01433 879 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 ARHGAP44Q17R89 818 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 SRGAP1Q7Z6B7 1085 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 WDR49Q8IV35 697 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 ZNF710Q8N1W2 664 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 OLIG1Q8TAK6 271 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 KAT2BQ92831 832 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 KREMEN1Q96MU8 473 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 NOX5Q96PH1 765 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 ALS2CR12Q96Q35 445 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 AP5M1Q9H0R1 490 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 TFR2Q9UP52 801 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 AKT3Q9Y243 479 aa19.26■□□□□ 0.67
RAB39A-201ENST00000320578 MBLAC1A4D2B0 266 aaPredicted RBP19.25■□□□□ 0.67
RAB39A-201ENST00000320578 TUBB4BP68371 445 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 PCBP1Q15365 356 aaKnown RBP eCLIP19.25■□□□□ 0.67
RAB39A-201ENST00000320578 AMHR2Q16671 573 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 KIAA0319LQ8IZA0 1049 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 DHX38Q92620 1227 aaKnown RBP19.25■□□□□ 0.67
RAB39A-201ENST00000320578 JRKLQ9Y4A0 524 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 A0A087WZ62 844 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 A0A0A6YYK5 440 aaPredicted RBP19.25■□□□□ 0.67
RAB39A-201ENST00000320578 SMIM35A0A1B0GVV1 85 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 KPNA6O60684 536 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 GJB1P08034 283 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 MCF2P10911 925 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 AKR1A1P14550 325 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 ENOX2Q16206 610 aaKnown RBP19.25■□□□□ 0.67
RAB39A-201ENST00000320578 WHAMMP3Q1A5X7 153 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 KIAA0753Q2KHM9 967 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 WDR44Q5JSH3 913 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 ZBTB41Q5SVQ8 909 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 TDRD10Q5VZ19 366 aaKnown RBP19.25■□□□□ 0.67
RAB39A-201ENST00000320578 GPIHBP1Q8IV16 184 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 PPM1KQ8N3J5 372 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 FDXACB1Q9BRP7 624 aaPredicted RBP19.25■□□□□ 0.67
RAB39A-201ENST00000320578 KATNAL1Q9BW62 490 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 MINDY3Q9H8M7 445 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 ZSWIM8A7E2V4 1837 aa19.25■□□□□ 0.67
RAB39A-201ENST00000320578 DOCK3Q8IZD9 2030 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 MACROD2A1Z1Q3 448 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 LRRN2O75325 713 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 TOMM70O94826 608 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 HLA-DRAP01903 254 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 PRLRP16471 622 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 CTGFP29279 349 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 WNT7BP56706 349 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 NKX3-2P78367 333 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 TRAPPC11Q7Z392 1133 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 CEP112Q8N8E3 955 aa19.24■□□□□ 0.67
RAB39A-201ENST00000320578 ZIC5Q96T25 663 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms