RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PCDHB18PQ96TA0 734 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 MPHOSPH6Q99547 160 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 SELENOOQ9BVL4 669 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 AMFRQ9UKV5 643 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 COG5Q9UP83 839 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 ZSCAN5CA6NGD5 496 aaPredicted RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 GLI1P08151 1106 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 MMEP08473 750 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 CYP2C8P10632 490 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 KRT5P13647 590 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 CYP11B1P15538 503 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 GTF2H1P32780 548 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 WNT7BP56706 349 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 MOGSQ13724 837 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 TARBP2Q15633 366 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 SEZ6Q53EL9 994 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 FBXO16Q8IX29 292 aaPredicted RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 PRPF31Q8WWY3 499 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 PBKQ96KB5 322 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 MMP19Q99542 508 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 HAPLN2Q9GZV7 340 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 ISCUQ9H1K1 167 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 KIAA1586Q9HCI6 787 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 CTTNBP2NLQ9P2B4 639 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 SUCLA2Q9P2R7 463 aaPredicted RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 NOCTQ9UK39 431 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 KIAA1217Q5T5P2 1943 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 ESYT3A0FGR9 886 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 PHACTR2O75167 634 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 CLSTN1O94985 981 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 CHRNB2P17787 502 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 OSBPP22059 807 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 RFC5P40937 340 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 GYS2P54840 703 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 GUCY2DQ02846 1103 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 BIRC3Q13489 604 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 CAPSQ13938 189 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 GLE1Q53GS7 698 aaKnown RBP8.15□□□□□ -1.1
IFT88-201ENST00000319980 ZBTB41Q5SVQ8 909 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 TMEM63BQ5T3F8 832 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 DNAJC5GQ8N7S2 189 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 HES6Q96HZ4 224 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 FGD4Q96M96 766 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 SPATA33Q96N06 139 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 MSTO1Q9BUK6 570 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 EPB41L5Q9HCM4 733 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 STXBP5LQ9Y2K9 1186 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 STYXL1Q9Y6J8 313 aa8.15□□□□□ -1.1
IFT88-201ENST00000319980 CES2O00748 559 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 MAFO75444 373 aaPredicted RBP8.15□□□□□ -1.11
IFT88-201ENST00000319980 HEXIM1O94992 359 aaKnown RBP8.15□□□□□ -1.11
IFT88-201ENST00000319980 CALCAP01258 141 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 EDN1P05305 212 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 SRGAP2CP0DJJ0 459 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 PDE6CP51160 858 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 GPC5P78333 572 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 HSP90B2PQ58FF3 399 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 CELF3Q5SZQ8 465 aaKnown RBP8.15□□□□□ -1.11
IFT88-201ENST00000319980 SLFN12LQ6IEE8 588 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 GPAT2Q6NUI2 795 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 CRELD2Q6UXH1 353 aaPredicted RBP8.15□□□□□ -1.11
IFT88-201ENST00000319980 SND1Q7KZF4 910 aaKnown RBP eCLIP8.15□□□□□ -1.11
IFT88-201ENST00000319980 RHOT2Q8IXI1 618 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 LRRC71Q8N4P6 559 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 ACTRT1Q8TDG2 376 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 AFAP1L1Q8TED9 768 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 IFT81Q8WYA0 676 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 COPS5Q92905 334 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 GPR20Q99678 358 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 TCHPQ9BT92 498 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 EFCC1Q9HA90 598 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 RBAKQ9NYW8 714 aaPredicted RBP8.15□□□□□ -1.11
IFT88-201ENST00000319980 NCANO14594 1321 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 TRPM7Q96QT4 1865 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 DOCK5Q9H7D0 1870 aa8.15□□□□□ -1.11
IFT88-201ENST00000319980 DNAJC25-GNG10A0A024R161 153 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TTLL13PA6NNM8 815 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 PGRMC1O00264 195 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 ATMINO43313 823 aaPredicted RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 ADCY3O60266 1144 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 RTN2O75298 545 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 GJA5P36382 358 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TNNC1P63316 161 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 FMO1Q01740 532 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 PSMD6Q15008 389 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 KCTD19Q17RG1 926 aaPredicted RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 WDR44Q5JSH3 913 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TDRD10Q5VZ19 366 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 C15orf39Q6ZRI6 1047 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 MSL3Q8N5Y2 521 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 AENQ8WTP8 325 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 ZNF668Q96K58 619 aaPredicted RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
IFT88-201ENST00000319980 ACBD3Q9H3P7 528 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms