RNA–Protein interactions for RNA: ENST00000318962.8

ALS2CL-201, Transcript of ALS2 C-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALS2CL, Length 4,741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CL-201ENST00000318962 DLGAP2Q9P1A6 1054 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 CPSF3Q9UKF6 684 aaKnown RBP12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 NVLO15381 856 aaKnown RBP12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 TRIM49P0CI25 452 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 TRIM49CP0CI26 452 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 MDM2Q00987 491 aaPredicted RBP12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 THOC5Q13769 683 aaKnown RBP12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 TRIM72Q6ZMU5 477 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 HIPK4Q8NE63 616 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 TRIM56Q9BRZ2 755 aaKnown RBP12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 HAUS8Q9BT25 410 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 ACAD9Q9H845 621 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 MLXIPLQ9NP71 852 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 PCDHA10Q9Y5I2 948 aa12.64□□□□□ -0.39
ALS2CL-201ENST00000318962 FAM237AA0A1B0GTK4 181 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 PLS3P13797 630 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 ZFXP17010 805 aaPredicted RBP12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 SOX5P35711 763 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 CDO1Q16878 200 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 ATG16L1Q676U5 607 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 MCUQ8NE86 351 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 MYCBPAPQ8TBZ2 947 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 FAM161BQ96MY7 647 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 NUP85Q9BW27 656 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 HEMGNQ9BXL5 484 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 FAM129AQ9BZQ8 928 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 TRIM10Q9UDY6 481 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 SLIT1O75093 1534 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 HSPA9P38646 679 aaKnown RBP12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 SERPINB4P48594 390 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 LAMB3Q13751 1172 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 LRRC14Q15048 493 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 C16orf86Q6ZW13 317 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 FBXL13Q8NEE6 735 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 RNF139Q8WU17 664 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 SLC16A3O15427 465 aaKnown RBP12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 EEF1B2P24534 225 aaKnown RBP12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 OCA2Q04671 838 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 PPP6R3Q5H9R7 873 aaPredicted RBP12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 HSPH1Q92598 858 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 EMSYQ7Z589 1322 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 TULP2O00295 520 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 MYBL1P10243 752 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 PPP4CP60510 307 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 PASD1Q8IV76 773 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 WNT8AQ9H1J5 351 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 SENP1Q9P0U3 644 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
ALS2CL-201ENST00000318962 UBE4BO95155 1302 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 TOM1L1O75674 476 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 S100BP04271 92 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ITPK1Q13572 414 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 NAB2Q15742 525 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ZNF746Q6NUN9 644 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 TTC39CQ8N584 583 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 LPAR1Q92633 364 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 CFAP36Q96G28 342 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 BAG5Q9UL15 447 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 DNAJC6O75061 913 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 RASA1P20936 1047 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 SARSP49591 514 aaKnown RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ZNF211Q13398 564 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ACBD5Q5T8D3 534 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 C4orf50Q6ZRC1 276 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 LRRN4CLQ8ND94 238 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 FAF2Q96CS3 445 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ROPN1BQ9BZX4 212 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 POLR3FQ9H1D9 316 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ROPN1Q9HAT0 212 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 NDUFB10O96000 172 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 CARSP49589 748 aaKnown RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 GPC3P51654 580 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 CYLC2Q14093 348 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 HOMEZQ8IX15 550 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 USP38Q8NB14 1042 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ICA1LQ8NDH6 482 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 USP6NLQ92738 828 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 MRPL4Q9BYD3 311 aaKnown RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 PAPOLBQ9NRJ5 636 aaKnown RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 SATB2Q9UPW6 733 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 MAN1A2O60476 641 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 KRT7P08729 469 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 GNA15P30679 374 aa12.62□□□□□ -0.39
ALS2CL-201ENST00000318962 MED21Q13503 144 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms