RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PRKAG3Q9UGI9 489 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 PARP2Q9UGN5 583 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 FAN1Q9Y2M0 1017 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 UBA7P41226 1012 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 OR1G1P47890 313 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 PKP1Q13835 747 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 GIT2Q14161 759 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 DCAF4L1Q3SXM0 396 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 KIAA0319Q5VV43 1072 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 CD300LGQ6UXG3 332 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 ALKAL1Q6UXT8 129 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 RABGGTAQ92696 567 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 PPP1R10Q96QC0 940 aaKnown RBP16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 GPR62Q9BZJ7 368 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 EPHX3Q9H6B9 360 aa16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 RBM19Q9Y4C8 960 aaKnown RBP16.05■□□□□ 0.16
PPP1CA-201ENST00000312989 FSD2A1L4K1 749 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 CNPP09543 421 aaKnown RBP16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 EPCAMP16422 314 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 GRM5P41594 1212 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 GPBP1Q86WP2 473 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 HACE1Q8IYU2 909 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 ZBTB45Q96K62 511 aaPredicted RBP16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 KLHL5Q96PQ7 755 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 MRPL4Q9BYD3 311 aaKnown RBP16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 ZSCAN16Q9H4T2 348 aaPredicted RBP16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 ODF2LQ9ULJ1 636 aa16.04■□□□□ 0.16
PPP1CA-201ENST00000312989 FAM189A1O60320 539 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 KIF4AO95239 1232 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 DSG1Q02413 1049 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 TUSC3Q13454 348 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 CBX2Q14781 532 aaPredicted RBP16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 LARP4BQ92615 738 aaKnown RBP16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 B3GALT6Q96L58 329 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 ZMAT2Q96NC0 199 aaKnown RBP16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 ADPGKQ9BRR6 497 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 RXFP1Q9HBX9 757 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 GDAQ9Y2T3 454 aa16.03■□□□□ 0.16
PPP1CA-201ENST00000312989 CASTOR2A6NHX0 329 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 LOC730098B7Z3J9 87 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 MCF2P10911 925 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 DDIT3P35638 169 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 CLCN4P51793 760 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 SOX4Q06945 474 aaPredicted RBP16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 ZNF568Q3ZCX4 644 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 GLRA4Q5JXX5 417 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 KANK3Q6NY19 840 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 FUT10Q6P4F1 479 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 CASP10Q92851 521 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 SNX27Q96L92 541 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 ADAM28Q9UKQ2 775 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 TRIOO75962 3097 aa16.02■□□□□ 0.16
PPP1CA-201ENST00000312989 PI4K2BG5E9Z4 385 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 TEX28O15482 410 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 TOM1L1O75674 476 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 PAPLNO95428 1278 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 PIGRP01833 764 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 MCL1Q07820 350 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 SLC39A4Q6P5W5 647 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 MPZL3Q6UWV2 235 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 HAUS6Q7Z4H7 955 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 C3orf58Q8NDZ4 430 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 FAM50BQ9Y247 325 aa16.01■□□□□ 0.15
PPP1CA-201ENST00000312989 SMIM28A0A1B0GU29 152 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 MYMKA6NI61 221 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 TMEM189-UBE2V1I3L0A0 370 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 THP07101 528 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 HOXB8P17481 243 aaPredicted RBP16■□□□□ 0.15
PPP1CA-201ENST00000312989 GLUD2P49448 558 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 DHX8Q14562 1220 aaKnown RBP16■□□□□ 0.15
PPP1CA-201ENST00000312989 RTP2Q5QGT7 225 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 ZBTB33Q86T24 672 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 HSCBQ8IWL3 235 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 GPR65Q8IYL9 337 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 C12orf76Q8N812 135 aaPredicted RBP16■□□□□ 0.15
PPP1CA-201ENST00000312989 DNAJC19Q96DA6 116 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 COLEC11Q9BWP8 271 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 APOL5Q9BWW9 433 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 STRA6Q9BX79 667 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 GOLGA2P5Q9HBQ8 144 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 CNTN3Q9P232 1028 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 LARSQ9P2J5 1176 aaKnown RBP16■□□□□ 0.15
PPP1CA-201ENST00000312989 STK17AQ9UEE5 414 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 PPP1R37O75864 691 aa16■□□□□ 0.15
PPP1CA-201ENST00000312989 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
PPP1CA-201ENST00000312989 KCNE1P15382 129 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms