RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CHORDC1Q9UHD1 332 aaPredicted RBP19.27■□□□□ 0.68
SPSB4-201ENST00000310546 PCYOX1Q9UHG3 505 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 ALG6Q9Y672 507 aa19.27■□□□□ 0.68
SPSB4-201ENST00000310546 KLRF2D3W0D1 207 aa19.27■□□□□ 0.67
SPSB4-201ENST00000310546 CACNB3P54284 484 aa19.27■□□□□ 0.67
SPSB4-201ENST00000310546 TAF1BQ53T94 588 aaPredicted RBP19.27■□□□□ 0.67
SPSB4-201ENST00000310546 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.67
SPSB4-201ENST00000310546 REXO1Q8N1G1 1221 aaKnown RBP19.27■□□□□ 0.67
SPSB4-201ENST00000310546 ZNF513Q8N8E2 541 aaPredicted RBP19.27■□□□□ 0.67
SPSB4-201ENST00000310546 DTNBP1Q96EV8 351 aa19.27■□□□□ 0.67
SPSB4-201ENST00000310546 A0A1W2PRG0 241 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 KRT36O76013 467 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 SLC15A2Q16348 729 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 FOXR2Q6PJQ5 311 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 CCDC65Q8IXS2 484 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.26■□□□□ 0.67
SPSB4-201ENST00000310546 TAS2R14Q9NYV8 317 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 COG5Q9UP83 839 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 SYNGAP1Q96PV0 1343 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 MAGEA13PA6NCF6 341 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 E9PMD0 336 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 MARCH6O60337 910 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 EYA4O95677 639 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 LMNAP02545 664 aaKnown RBP19.26■□□□□ 0.67
SPSB4-201ENST00000310546 KRT18P05783 430 aaKnown RBP19.26■□□□□ 0.67
SPSB4-201ENST00000310546 CHKAP35790 457 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 CDR2Q01850 454 aa19.26■□□□□ 0.67
SPSB4-201ENST00000310546 EPM2AIP1Q7L775 607 aaPredicted RBP19.26■□□□□ 0.67
SPSB4-201ENST00000310546 THAP12O43422 761 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 SPAG7O75391 227 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 DCTN3O75935 186 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 TTLL1O95922 423 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 TMEM253P0C7T8 217 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 FXR2P51116 673 aaKnown RBP eCLIP19.25■□□□□ 0.67
SPSB4-201ENST00000310546 CERKLQ49MI3 558 aaPredicted RBP19.25■□□□□ 0.67
SPSB4-201ENST00000310546 RBM26Q5T8P6 1007 aaKnown RBP19.25■□□□□ 0.67
SPSB4-201ENST00000310546 C4orf50Q6ZRC1 276 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 PREBQ9HCU5 417 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 PASKQ96RG2 1323 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 ETS2P15036 469 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 HMGB2P26583 209 aaKnown RBP19.25■□□□□ 0.67
SPSB4-201ENST00000310546 PPP1R21Q6ZMI0 780 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 PTPRN2Q92932 1015 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
SPSB4-201ENST00000310546 AAASQ9NRG9 546 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 GALNT8Q9NY28 637 aa19.25■□□□□ 0.67
SPSB4-201ENST00000310546 CETPP11597 493 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 WDR4P57081 412 aaKnown RBP19.24■□□□□ 0.67
SPSB4-201ENST00000310546 GIT2Q14161 759 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 LRRC74BQ6ZQY2 392 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 NCAPG2Q86XI2 1143 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 DGKHQ86XP1 1220 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 UBL4BQ8N7F7 174 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 TIPINQ9BVW5 301 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 NAALADL1Q9UQQ1 740 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 RASA4BC9J798 803 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 RASA4O43374 803 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 CASP5P51878 434 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 JAM2P57087 298 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 PPFIBP2Q8ND30 876 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 PWWP2AQ96N64 755 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 ZWILCHQ9H900 591 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 ASIC3Q9UHC3 531 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 STARD13Q9Y3M8 1113 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 COILP38432 576 aaPredicted RBP19.24■□□□□ 0.67
SPSB4-201ENST00000310546 BTDP43251 543 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 KPNB1Q14974 876 aaKnown RBP19.24■□□□□ 0.67
SPSB4-201ENST00000310546 EPHA7Q15375 998 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 CNPY1Q3B7I2 92 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 PALB2Q86YC2 1186 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 WDR66Q8TBY9 1149 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 GATA6Q92908 595 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 MIPEPQ99797 713 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 ATP8A2Q9NTI2 1148 aa19.24■□□□□ 0.67
SPSB4-201ENST00000310546 TBX10O75333 385 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 TTC4O95801 387 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 IMPDH2P12268 514 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 LMNB1P20700 586 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 CTNNA2P26232 953 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 PTPN4P29074 926 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 OCRLQ01968 901 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 MYBPC3Q14896 1274 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 TRIP13Q15645 432 aaPredicted RBP19.23■□□□□ 0.67
SPSB4-201ENST00000310546 SEL1L2Q5TEA6 688 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 SDCCAG8Q86SQ7 713 aaPredicted RBP19.23■□□□□ 0.67
SPSB4-201ENST00000310546 GPBP1Q86WP2 473 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 KIAA0825Q8IV33 1275 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 UBA5Q9GZZ9 404 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 VCX3BQ9H321 246 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 VCX3AQ9NNX9 186 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 SIX2Q9NPC8 291 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 DNAAF2Q9NVR5 837 aaKnown RBP19.23■□□□□ 0.67
SPSB4-201ENST00000310546 STK32BQ9NY57 414 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 ZFP69BQ9UJL9 534 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 KIAA1024Q9UPX6 916 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 PCDHA2Q9Y5H9 948 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 PCNTO95613 3336 aa19.23■□□□□ 0.67
SPSB4-201ENST00000310546 ZSCAN9O15535 394 aaPredicted RBP19.23■□□□□ 0.67
SPSB4-201ENST00000310546 AKAP3O75969 853 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms