RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 GLRA2P23416 452 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 CASP14P31944 242 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 PSEN2P49810 448 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 LAMC2Q13753 1193 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 PTPN14Q15678 1187 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 SMAD1Q15797 465 aaKnown RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 ZNF792Q3KQV3 632 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 DUSP28Q4G0W2 176 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 SDHAF4Q5VUM1 108 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 LLGL2Q6P1M3 1020 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 CNNM4Q6P4Q7 775 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 RAD9BQ6WBX8 426 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 IRF2BP1Q8IU81 584 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 NETO2Q8NC67 525 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 SHCBP1Q8NEM2 672 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 OLIG1Q8TAK6 271 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 C12orf42Q96LP6 360 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 MTA3Q9BTC8 594 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 AGO3Q9H9G7 860 aaKnown RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 WDR81Q562E7 1941 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 ATXN2Q99700 1313 aaKnown RBP5.35□□□□□ -1.55
CAST-201ENST00000309190 EVPLQ92817 2033 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 TET1Q8NFU7 2136 aa5.35□□□□□ -1.55
CAST-201ENST00000309190 SLC15A5A6NIM6 579 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 STX10O60499 249 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 AKAP3O75969 853 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 NR3C1P04150 777 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 PLEKP08567 350 aaPredicted RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 RPL17P18621 184 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 OR1G1P47890 313 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 ACLYP53396 1101 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 RCAN1P53805 252 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 SETQ01105 290 aaPredicted RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 MTM1Q13496 603 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 TRPC3Q13507 836 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 CCDC85BQ15834 202 aaPredicted RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 ARL6IP4Q66PJ3 421 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 ABHD15Q6UXT9 468 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 ZBTB8OSQ8IWT0 167 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 DAW1Q8N136 415 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 SLC5A5Q92911 643 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 C18orf25Q96B23 403 aaPredicted RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 DDX27Q96GQ7 796 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 PANX2Q96RD6 677 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 MTMR12Q9C0I1 747 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAST-201ENST00000309190 VRTNQ9H8Y1 702 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 AGPAT5Q9NUQ2 364 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 CDY2AQ9Y6F7 541 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 SYNGAP1Q96PV0 1343 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 C17orf102A2RUQ5 167 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 PPP1R3GB7ZBB8 358 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 TPD52L2O43399 206 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 PPFIA4O75335 1185 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 B3GAT3O94766 335 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 GFPT2O94808 682 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 GJB6O95452 261 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 EYA4O95677 639 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 TMEM191BP0C7N4 346 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 CIITAP33076 1130 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 SPIRE1Q08AE8 756 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 CAPSQ13938 189 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 GRB14Q14449 540 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 KRT31Q15323 416 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 DAB2IPQ5VWQ8 1189 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 KHSRPQ92945 711 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAST-201ENST00000309190 P2RX5Q93086 422 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 SH3GL2Q99962 352 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 PAAF1Q9BRP4 392 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 LSM14BQ9BX40 385 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 IFIH1Q9BYX4 1025 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 MCOLN1Q9GZU1 580 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 EPC1Q9H2F5 836 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 PPP2R2CQ9Y2T4 447 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 CEP250Q9BV73 2442 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 SPTBN5Q9NRC6 3674 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 SEPT4O43236 478 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 AKR1B10O60218 316 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 MAP3K6O95382 1288 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 HMGCRP04035 888 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 XRCC5P13010 732 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 MYOGP15173 224 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 MLH1P40692 756 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 YARSP54577 528 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 ZNF618Q5T7W0 954 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 GPR161Q8N6U8 529 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 SLC30A5Q8TAD4 765 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 ENOX1Q8TC92 643 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 ZNF507Q8TCN5 953 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 KIF12Q96FN5 646 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 UBE2TQ9NPD8 197 aaPredicted RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 G3BP2Q9UN86 482 aaKnown RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 MAGED2Q9UNF1 606 aaPredicted RBP5.34□□□□□ -1.55
CAST-201ENST00000309190 USTQ9Y2C2 406 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 SNX9Q9Y5X1 595 aa5.34□□□□□ -1.55
CAST-201ENST00000309190 REV3LO60673 3130 aa5.34□□□□□ -1.56
CAST-201ENST00000309190 PARP14Q460N5 1801 aa5.34□□□□□ -1.56
CAST-201ENST00000309190 DOCK5Q9H7D0 1870 aa5.34□□□□□ -1.56
CAST-201ENST00000309190 F5H423 210 aaPredicted RBP5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms