RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 GPR37L1O60883 481 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 BMP15O95972 392 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 SSBP05455 408 aaKnown RBP eCLIP21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 PDCP20941 246 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 IGFBP6P24592 240 aaPredicted RBP21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 CLCN4P51793 760 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 RAD51AP2Q09MP3 1159 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 DMP1Q13316 513 aaPredicted RBP21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 DCAF4L1Q3SXM0 396 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 KANK3Q6NY19 840 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 USP49Q70CQ1 688 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 RNF135Q8IUD6 432 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 TMEM161BQ8NDZ6 487 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 RPS6KC1Q96S38 1066 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 POP1Q99575 1024 aaKnown RBP21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 RXFP1Q9HBX9 757 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 STK39Q9UEW8 545 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 GTF3C3Q9Y5Q9 886 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 MYO10Q9HD67 2058 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 ZNF318Q5VUA4 2279 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 SLC16A4O15374 487 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 BRD1O95696 1058 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 SRGAP2BP0DMP2 458 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 PLS3P13797 630 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 LONP1P36776 959 aaKnown RBP21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 DSG1Q02413 1049 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 TUSC3Q13454 348 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 XKR4Q5GH76 650 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 FUT10Q6P4F1 479 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 C12orf76Q8N812 135 aaPredicted RBP21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 B3GALT6Q96L58 329 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 ADPGKQ9BRR6 497 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 TARS2Q9BW92 718 aaKnown RBP21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 ADAM7Q9H2U9 754 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 KMT5AQ9NQR1 393 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 KCND2Q9NZV8 630 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 RAPGEFL1Q9UHV5 662 aa21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 FBXO2Q9UK22 296 aaPredicted RBP21.8■■□□□ 1.08
PDZRN3-202ENST00000308537 FAM86C2PA6NEL3 165 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 DCXO43602 365 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 PLCG1P19174 1290 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 CACNB1Q02641 598 aaPredicted RBP21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 KARSQ15046 597 aaKnown RBP21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 HERC4Q5GLZ8 1057 aaPredicted RBP21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 CD300LGQ6UXG3 332 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 ALKAL1Q6UXT8 129 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 SNX21Q969T3 373 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 PPP1R10Q96QC0 940 aaKnown RBP21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 FIZ1Q96SL8 496 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 MUTYHQ9UIF7 546 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 ADAM28Q9UKQ2 775 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 GDAQ9Y2T3 454 aa21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 RBM19Q9Y4C8 960 aaKnown RBP21.79■■□□□ 1.08
PDZRN3-202ENST00000308537 CASTOR2A6NHX0 329 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 TEX28O15482 410 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 KIF4AO95239 1232 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 MAPTP10636 758 aaKnown RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 CA8P35219 290 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 ZNF131P52739 623 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 HSP90AA2PQ14568 343 aaPredicted RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 BMS1Q14692 1282 aaKnown RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 GPR65Q8IYL9 337 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 ZBTB45Q96K62 511 aaPredicted RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 REEP2Q9BRK0 252 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 COLEC11Q9BWP8 271 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 MRPL4Q9BYD3 311 aaKnown RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 CCSER1Q9C0I3 900 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 POMKQ9H5K3 350 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 MRPL17Q9NRX2 175 aaKnown RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 DAXXQ9UER7 740 aaPredicted RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 MORC2Q9Y6X9 1032 aaPredicted RBP21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 MUC6Q6W4X9 2439 aa21.78■■□□□ 1.08
PDZRN3-202ENST00000308537 PAPLNO95428 1278 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 URODP06132 367 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 THP07101 528 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 WEE2P0C1S8 567 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 COL9A1P20849 921 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 UBA7P41226 1012 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 GRM5P41594 1212 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 GLUD2P49448 558 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 NCKAP1LP55160 1127 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 ITIH3Q06033 890 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 TPRNQ4KMQ1 711 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 RAD54LQ92698 747 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 EPSTI1Q96J88 318 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 CDK5RAP3Q96JB5 506 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 HAPLN2Q9GZV7 340 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 FOXD4L1Q9NU39 408 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 DZANK1Q9NVP4 752 aa21.77■■□□□ 1.08
PDZRN3-202ENST00000308537 DOCK6Q96HP0 2047 aa21.77■■□□□ 1.07
PDZRN3-202ENST00000308537 ZDBF2Q9HCK1 2354 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 C2CD2LO14523 706 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 ALADP13716 330 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 MARCKSP29966 332 aaPredicted RBP21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 SOX4Q06945 474 aaPredicted RBP21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 MCM6Q14566 821 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 TMEM132AQ24JP5 1023 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 ZNF568Q3ZCX4 644 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 GLRA4Q5JXX5 417 aa21.76■■□□□ 1.07
PDZRN3-202ENST00000308537 TMEM31Q5JXX7 168 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms