RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 USP37Q86T82 979 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 FBXL13Q8NEE6 735 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 OLIG1Q8TAK6 271 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 LNX1Q8TBB1 728 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 FNBP1Q96RU3 617 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 RNF216Q9NWF9 866 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 RAB20Q9NX57 234 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 RBAKQ9NYW8 714 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 PTPRJQ12913 1337 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 NCK2O43639 380 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 GAS2O43903 313 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 SASH3O75995 380 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 EFNA5P52803 228 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 NAB2Q15742 525 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 DUSP28Q4G0W2 176 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 CDCA2Q69YH5 1023 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 NFRKBQ6P4R8 1299 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 COG1Q8WTW3 980 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 U2AF1L4Q8WU68 220 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 KREMEN1Q96MU8 473 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 PSMB7Q99436 277 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 KIAA1586Q9HCI6 787 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 FLRT1Q9NZU1 646 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 TMCO5BA8MYB1 307 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 CLDN3O15551 220 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 CSDE1O75534 798 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 PRKCBP05771 671 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 SCP2P22307 547 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 RFX1P22670 979 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 VPS36Q86VN1 386 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 CDR2LQ86X02 465 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 ZBTB8OSQ8IWT0 167 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 EXOC8Q8IYI6 725 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 OR6J1Q8NGC5 347 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 EMID1Q96A84 441 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 COQ4Q9Y3A0 265 aa24.26■■□□□ 1.47
PDLIM2-202ENST00000308354 TRPM7Q96QT4 1865 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 SIP14410 1827 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 H3BRB1 525 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 TNFSF9P41273 254 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 VSNL1P62760 191 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 PSMD6Q15008 389 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 MAPK6Q16659 721 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 MORN1Q5T089 497 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 CREG2Q8IUH2 290 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 PPP1R13LQ8WUF5 828 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 TATDN2Q93075 761 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 MRPL4Q9BYD3 311 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 TUT1Q9H6E5 874 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 MINDY3Q9H8M7 445 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 ACP6Q9NPH0 428 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 EVPLQ92817 2033 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 INO80B-WBP1J3KQ70 363 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 PPFIA4O75335 1185 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 CXCR5P32302 372 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 CCL14Q16627 93 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 LONRF2Q1L5Z9 754 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 GLIPR1L2Q4G1C9 344 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 IFNL1Q8IU54 200 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 LENG1Q96BZ8 264 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 OSBPL9Q96SU4 736 aa24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 JPH2Q9BR39 696 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 INO80BQ9C086 356 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 SEPT11Q9NVA2 429 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-202ENST00000308354 B4GALT5O43286 388 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 MMP3P08254 477 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 GPC3P51654 580 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 MAP2K5Q13163 448 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 GRM1Q13255 1194 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 PALB2Q86YC2 1186 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 SLC20A1Q8WUM9 679 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 ACO2Q99798 780 aaKnown RBP24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 TLR10Q9BXR5 811 aa24.24■■□□□ 1.47
PDLIM2-202ENST00000308354 PALMO75781 387 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 GTF2H1P32780 548 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 IRX5P78411 483 aaPredicted RBP24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 ZNF484Q5JVG2 852 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 ZPBP2Q6X784 338 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 HELQQ8TDG4 1101 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 RPGRIP1Q96KN7 1286 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 SYT11Q9BT88 431 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 SLC5A4Q9NY91 659 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 HYOU1Q9Y4L1 999 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 TOM1L1O75674 476 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 PRLRP16471 622 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 CYP2B6P20813 491 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 CYP2C19P33261 490 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 TNFAIP2Q03169 654 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 PRPF4BQ13523 1007 aaKnown RBP24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 KIF22Q14807 665 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 SLC30A5Q8TAD4 765 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 PRDM10Q9NQV6 1147 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 NENFQ9UMX5 172 aa24.23■■□□□ 1.47
PDLIM2-202ENST00000308354 KIAA0391O15091 583 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 DYNC1LI2O43237 492 aaPredicted RBP24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 LDHAP00338 332 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 IQCF3P0C7M6 154 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 PLA2G4AP47712 749 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 BIRC3Q13489 604 aa24.22■■□□□ 1.47
PDLIM2-202ENST00000308354 TDRD10Q5VZ19 366 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms