RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TAS2R42Q7RTR8 314 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 AP1M1Q9BXS5 423 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 PARVAQ9NVD7 372 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 GAS2O43903 313 aaKnown RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 EVI5O60447 810 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 B3GAT3O94766 335 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 VIL1P09327 827 aaKnown RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 U2AF2P26368 475 aaKnown RBP eCLIP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 C2orf54Q08AI8 447 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 PPIL2Q13356 520 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 C10orf120Q5SQS8 335 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 TTC23LQ6PF05 361 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 TRIM72Q6ZMU5 477 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 PTF1AQ7RTS3 328 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 CDR2LQ86X02 465 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 BHMTQ93088 406 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 MED15Q96RN5 788 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 KCND2Q9NZV8 630 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 SMARCA1P28370 1054 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 CLCN3P51790 818 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 PLTPP55058 493 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 KDELC2Q7Z4H8 507 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 SLITRK1Q96PX8 696 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 SYT17Q9BSW7 474 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 AFF4Q9UHB7 1163 aaKnown RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 NFIBO00712 420 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 NFRKBQ6P4R8 1299 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 SZRD1Q7Z422 152 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 DNERQ8NFT8 737 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 MAP3K14Q99558 947 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 EPAS1Q99814 870 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 MAGEB5Q9BZ81 275 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 SENP2Q9HC62 589 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 MSRAQ9UJ68 235 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 HSD17B4P51659 736 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 ZC2HC1CQ53FD0 456 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 FRMD5Q7Z6J6 570 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 ZNF564Q8TBZ8 553 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 FAM49BQ9NUQ9 324 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 DPP3Q9NY33 737 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 NRBP1Q9UHY1 535 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 PPME1Q9Y570 386 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 ARHGAP23Q9P227 1491 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 GPC4O75487 556 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 SLMAPQ14BN4 828 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 HPDLQ96IR7 371 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 BAZ2BQ9UIF8 2168 aaKnown RBP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 FAM205CA6NFA0 338 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ZRANB2O95218 330 aaKnown RBP eCLIP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 FTLP02792 175 aaPredicted RBP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 KLRC1P26715 233 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 PAPOLAP51003 745 aaKnown RBP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 NR1H3Q13133 447 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ACVR2BQ13705 512 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 TMED2Q15363 201 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 TMC7Q7Z402 723 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 TRPM4Q8TD43 1214 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ZMYND12Q9H0C1 365 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 SNX2O60749 519 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 NDUFA10O95299 355 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ESRRBO95718 433 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 NPEPPSP55786 919 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 FSCN1Q16658 493 aaKnown RBP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 BBS9Q3SYG4 887 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 HEATR6Q6AI08 1181 aaKnown RBP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 RDM1Q8NG50 284 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 PPP1R13BQ96KQ4 1090 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ANKEF1Q9NU02 776 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 NDFIP2Q9NV92 336 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 CLTAP09496 248 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 GFPT1Q06210 699 aaPredicted RBP11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 GTF2H3Q13889 308 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 PYROXD1Q8WU10 500 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 YIPF2Q9BWQ6 316 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 BAG5Q9UL15 447 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 EXTL3O43909 919 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ITGB3P05106 788 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 ASPHQ12797 758 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 EFHBQ8N7U6 833 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 KIF13AQ9H1H9 1805 aa11.36□□□□□ -0.59
SYNPO2-201ENST00000307142 PRR23AA6NEV1 266 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 LRRC53A6NM62 1247 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 VWA5AO00534 786 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 CYP26A1O43174 497 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 KLRC2P26717 231 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 ARL4DP49703 201 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 NT5C1AQ9BXI3 368 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 FAM114A2Q9NRY5 505 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 FAN1Q9Y2M0 1017 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 NDUFAB1O14561 156 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 KRT7P08729 469 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 MYBL1P10243 752 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 TFDP2Q14188 446 aa11.35□□□□□ -0.59
SYNPO2-201ENST00000307142 MFSD10Q14728 455 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms