RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MEIS3P2A8K0S8 358 aa29.56■■■□□ 2.32
HDAC3-201ENST00000305264 IKBKBO14920 756 aa29.56■■■□□ 2.32
HDAC3-201ENST00000305264 RGS19P49795 217 aa29.56■■■□□ 2.32
HDAC3-201ENST00000305264 SNRNP35Q16560 246 aaKnown RBP29.56■■■□□ 2.32
HDAC3-201ENST00000305264 HSP90AA4PQ58FG1 418 aa29.56■■■□□ 2.32
HDAC3-201ENST00000305264 CEP63Q96MT8 703 aa29.56■■■□□ 2.32
HDAC3-201ENST00000305264 C1orf112Q9NSG2 853 aa29.56■■■□□ 2.32
HDAC3-201ENST00000305264 SAMSN1Q9NSI8 373 aaKnown RBP29.56■■■□□ 2.32
HDAC3-201ENST00000305264 CPSF3Q9UKF6 684 aaKnown RBP29.56■■■□□ 2.32
HDAC3-201ENST00000305264 ANK1P16157 1881 aa29.56■■■□□ 2.32
HDAC3-201ENST00000305264 ZNF365Q70YC5 407 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 OTOP2Q7RTS6 562 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 ECHDC2Q86YB7 292 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 RNF214Q8ND24 703 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 LPPQ93052 612 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 MEFVO15553 781 aaPredicted RBP29.55■■■□□ 2.32
HDAC3-201ENST00000305264 LDHAP00338 332 aaKnown RBP29.55■■■□□ 2.32
HDAC3-201ENST00000305264 AKAP5P24588 427 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.55■■■□□ 2.323e-7■□□□□ 8.1
HDAC3-201ENST00000305264 FAM43BQ6ZT52 329 aaPredicted RBP29.55■■■□□ 2.32
HDAC3-201ENST00000305264 RNF169Q8NCN4 708 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 HSD3B7Q9H2F3 369 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 FANCLQ9NW38 375 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 FRMD4BQ9Y2L6 1034 aa29.55■■■□□ 2.32
HDAC3-201ENST00000305264 TRIP11Q15643 1979 aa29.54■■■□□ 2.32
HDAC3-201ENST00000305264 RALGAPA2Q2PPJ7 1873 aa29.54■■■□□ 2.32
HDAC3-201ENST00000305264 ZNF623O75123 536 aa29.54■■■□□ 2.32
HDAC3-201ENST00000305264 CXCL8P10145 99 aa29.54■■■□□ 2.32
HDAC3-201ENST00000305264 ZNF598Q86UK7 904 aaKnown RBP29.54■■■□□ 2.32
HDAC3-201ENST00000305264 IRF2BP1Q8IU81 584 aa29.54■■■□□ 2.32
HDAC3-201ENST00000305264 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.54■■■□□ 2.326e-10■■■■■ 27
HDAC3-201ENST00000305264 ABHD14A-ACY1A0A1B0GW23 586 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 RECQL4O94761 1208 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 CLTAP09496 248 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 MAGEA10P43363 369 aaPredicted RBP29.53■■■□□ 2.32
HDAC3-201ENST00000305264 FAM189BP81408 668 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 ENOX2Q16206 610 aaKnown RBP29.53■■■□□ 2.32
HDAC3-201ENST00000305264 TMEM240Q5SV17 173 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 MRPL10Q7Z7H8 261 aaKnown RBP29.53■■■□□ 2.32
HDAC3-201ENST00000305264 CCDC94Q9BW85 323 aaPredicted RBP29.53■■■□□ 2.32
HDAC3-201ENST00000305264 KIAA1586Q9HCI6 787 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 PTPRSQ13332 1948 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 BECN2A8MW95 431 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 PSRC1Q6PGN9 363 aaPredicted RBP29.53■■■□□ 2.32
HDAC3-201ENST00000305264 FAM186BQ8IYM0 893 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 THAP9Q9H5L6 903 aa29.53■■■□□ 2.32
HDAC3-201ENST00000305264 RBAKQ9NYW8 714 aaPredicted RBP29.53■■■□□ 2.32
HDAC3-201ENST00000305264 SLC16A3O15427 465 aaKnown RBP29.52■■■□□ 2.32
HDAC3-201ENST00000305264 FGBP02675 491 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 SKIP12755 728 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 ACTN1P12814 892 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 PSMC2P35998 433 aaKnown RBP29.52■■■□□ 2.32
HDAC3-201ENST00000305264 WNT7BP56706 349 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 FILIP1Q7Z7B0 1213 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 ACAP3Q96P50 834 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 MKNK1Q9BUB5 465 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 PDE4DIPQ5VU43 2346 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 ZNF233A6NK53 670 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 SMTNL1A8MU46 457 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 BAIAP3O94812 1187 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 EPB41P11171 864 aaKnown RBP29.52■■■□□ 2.32
HDAC3-201ENST00000305264 WDR5P61964 334 aaKnown RBP29.52■■■□□ 2.32
HDAC3-201ENST00000305264 KYAT1Q16773 422 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 AGMOQ6ZNB7 445 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 BRSK2Q8IWQ3 736 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 CXCL16Q9H2A7 254 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 PARP2Q9UGN5 583 aa29.52■■■□□ 2.32
HDAC3-201ENST00000305264 FGFR1OPO95684 399 aaKnown RBP29.51■■■□□ 2.31
HDAC3-201ENST00000305264 ITGA4P13612 1032 aa29.51■■■□□ 2.31
HDAC3-201ENST00000305264 CYP24A1Q07973 514 aa29.51■■■□□ 2.31
HDAC3-201ENST00000305264 CDKAL1Q5VV42 579 aa29.51■■■□□ 2.31
HDAC3-201ENST00000305264 CNOT6LQ96LI5 555 aaKnown RBP29.51■■■□□ 2.31
HDAC3-201ENST00000305264 RPF1Q9H9Y2 349 aaKnown RBP29.51■■■□□ 2.31
HDAC3-201ENST00000305264 RANBP2P49792 3224 aaKnown RBP29.51■■■□□ 2.31
HDAC3-201ENST00000305264 DEFB103AP81534 67 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 SLC10A6Q3KNW5 377 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 BORCS6Q96GS4 357 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 RBSNQ9H1K0 784 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 KLK14Q9P0G3 267 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 LAMA2P24043 3122 aaKnown RBP29.5■■■□□ 2.31
HDAC3-201ENST00000305264 MAPK13O15264 365 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 EFCAB14O75071 495 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 CCDC40Q4G0X9 1142 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 HACE1Q8IYU2 909 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 CRIPAKQ8N1N5 446 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 PLEKHO2Q8TD55 490 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 SNX27Q96L92 541 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 MFSD14AQ96MC6 490 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 TMEM161AQ9NX61 479 aa29.5■■■□□ 2.31
HDAC3-201ENST00000305264 H0YGN5 161 aa29.49■■■□□ 2.31
HDAC3-201ENST00000305264 PGBD4Q96DM1 585 aa29.49■■■□□ 2.31
HDAC3-201ENST00000305264 FAM212AQ96EL1 285 aa29.49■■■□□ 2.31
HDAC3-201ENST00000305264 CXXC1Q9P0U4 656 aaPredicted RBP29.49■■■□□ 2.31
HDAC3-201ENST00000305264 PDCD11Q14690 1871 aaKnown RBP29.49■■■□□ 2.31
HDAC3-201ENST00000305264 ZBBXA8MT70 800 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 TULP1O00294 542 aaPredicted RBP29.48■■■□□ 2.31
HDAC3-201ENST00000305264 EOMESO95936 686 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 ZNF18P17022 549 aa29.48■■■□□ 2.31
HDAC3-201ENST00000305264 YARSP54577 528 aaKnown RBP29.48■■■□□ 2.31
HDAC3-201ENST00000305264 ZFP42Q96MM3 310 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms