RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 HEY2Q9UBP5 337 aa15.37■□□□□ 0.05
CDT1-201ENST00000301019 TTC7AQ9ULT0 858 aaPredicted RBP15.37■□□□□ 0.05
CDT1-201ENST00000301019 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 CLDN3O15551 220 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 ITGA2BP08514 1039 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 VAV1P15498 845 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 PSMC4P43686 418 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 CASP5P51878 434 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 COASYQ13057 564 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 TRIM67Q6ZTA4 783 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 FNBP1Q96RU3 617 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 ALG6Q9Y672 507 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 PASKQ96RG2 1323 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 DOT1LQ8TEK3 1739 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 H3BRJ5 948 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 GRIA2P42262 883 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 PDE1CQ14123 709 aaPredicted RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 C2CD6Q53TS8 623 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 RNF168Q8IYW5 571 aaPredicted RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 SLC44A5Q8NCS7 719 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 LNX1Q8TBB1 728 aaPredicted RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 PYDC1Q8WXC3 89 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 HES6Q96HZ4 224 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 LIN28AQ9H9Z2 209 aaKnown RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 GCNT4Q9P109 453 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 SUCLA2Q9P2R7 463 aaPredicted RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 DDX3YO15523 660 aaKnown RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 FOXD2O60548 495 aaPredicted RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 TRAPPC10P48553 1259 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 PSMD7P51665 324 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 PLOD1Q02809 727 aaPredicted RBP15.36■□□□□ 0.05
CDT1-201ENST00000301019 KCNA1Q09470 495 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 STRN3Q13033 797 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 UNC13DQ70J99 1090 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 VPS36Q86VN1 386 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 PIP4K2CQ8TBX8 421 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 TGFBRAP1Q8WUH2 860 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 HSFX1Q9UBD0 423 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 AK5Q9Y6K8 562 aa15.36■□□□□ 0.05
CDT1-201ENST00000301019 PITPNM2Q9BZ72 1349 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 SLC37A4O43826 429 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 GSTA2P09210 222 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 TFPTP0C1Z6 253 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 KITP10721 976 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 ADCY8P40145 1251 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 KBTBD12Q3ZCT8 623 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 RNF43Q68DV7 783 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 CENPKQ9BS16 269 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 ASCC2Q9H1I8 757 aaPredicted RBP15.35■□□□□ 0.05
CDT1-201ENST00000301019 GANQ9H2C0 597 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 PACSIN3Q9UKS6 424 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 GOLGA8SH3BPF8 625 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 GOLGA8MH3BSY2 632 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 SPOPO43791 374 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 TNNI2P48788 182 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 KRT17Q04695 432 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 SEPT7Q16181 437 aaKnown RBP15.35■□□□□ 0.05
CDT1-201ENST00000301019 TRIM50Q86XT4 487 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 GUF1Q8N442 669 aaKnown RBP15.35■□□□□ 0.05
CDT1-201ENST00000301019 MAGEB18Q96M61 343 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 PNMA5Q96PV4 448 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 MARCOQ9UEW3 520 aaPredicted RBP15.35■□□□□ 0.05
CDT1-201ENST00000301019 ANAPC4Q9UJX5 808 aa15.35■□□□□ 0.05
CDT1-201ENST00000301019 A0A1W2PPM1 405 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 PALM3A6NDB9 673 aaPredicted RBP15.34■□□□□ 0.05
CDT1-201ENST00000301019 SMCO2A6NFE2 343 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 MEI4A8MW99 385 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 BANF1O75531 89 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 ENO1P06733 434 aaKnown RBP15.34■□□□□ 0.05
CDT1-201ENST00000301019 RARGP13631 454 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 PAX3P23760 479 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 CALML3P27482 149 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 PTPN4P29074 926 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 SLC1A5Q15758 541 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 SCUBE1Q8IWY4 988 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 THTPAQ9BU02 230 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 TIPINQ9BVW5 301 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 CCDC134Q9H6E4 229 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 TRPC5Q9UL62 973 aaPredicted RBP15.34■□□□□ 0.05
CDT1-201ENST00000301019 A0A0J9YVX5 310 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 CYP26A1O43174 497 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 KCNQ2O43526 872 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 ZBTB48P10074 688 aaPredicted RBP15.34■□□□□ 0.05
CDT1-201ENST00000301019 PON1P27169 355 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 PGM1P36871 562 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 ITGA8P53708 1063 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 TFAP4Q01664 338 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 MAP7Q14244 749 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
CDT1-201ENST00000301019 PARP6Q2NL67 630 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 ZFYVE27Q5T4F4 411 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 PHLDB3Q6NSJ2 640 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 RAPH1Q70E73 1250 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 RASSF3Q86WH2 238 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 CYTH3O43739 400 aa15.34■□□□□ 0.05
CDT1-201ENST00000301019 WFS1O76024 890 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms