RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 MAIP1Q8WWC4 291 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 RPGRQ92834 1020 aaKnown RBP11.72□□□□□ -0.53
SNX20-201ENST00000300590 MCUR1Q96AQ8 359 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 RBM41Q96IZ5 413 aaKnown RBP11.72□□□□□ -0.53
SNX20-201ENST00000300590 BHMT2Q9H2M3 363 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 C12orf65Q9H3J6 166 aaKnown RBP11.72□□□□□ -0.53
SNX20-201ENST00000300590 UBE2TQ9NPD8 197 aaPredicted RBP11.72□□□□□ -0.53
SNX20-201ENST00000300590 NINJ2Q9NZG7 142 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 NENFQ9UMX5 172 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 RPS6KL1Q9Y6S9 549 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 C1orf167Q5SNV9 1468 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 FAM47DPA6NHR8 397 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 GSTT1P30711 240 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 SKIV2L2P42285 1042 aaKnown RBP11.72□□□□□ -0.53
SNX20-201ENST00000300590 CPA2P48052 419 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 SYCP3Q8IZU3 236 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 NRG4Q8WWG1 115 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 STK33Q9BYT3 514 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 KCNQ5Q9NR82 932 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 LMCD1Q9NZU5 365 aa11.72□□□□□ -0.53
SNX20-201ENST00000300590 TBCAO75347 108 aaKnown RBP11.71□□□□□ -0.53
SNX20-201ENST00000300590 PYGBP11216 843 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 CTNNA2P26232 953 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 IL6STP40189 918 aaPredicted RBP11.71□□□□□ -0.53
SNX20-201ENST00000300590 ZBTB16Q05516 673 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
SNX20-201ENST00000300590 MTM1Q13496 603 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 PRR16Q569H4 304 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 DAB2IPQ5VWQ8 1189 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 PPP1R21Q6ZMI0 780 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 TRMT1LQ7Z2T5 733 aaKnown RBP11.71□□□□□ -0.53
SNX20-201ENST00000300590 ANKRD35Q8N283 1001 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 PPFIBP2Q8ND30 876 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 STMN2Q93045 179 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 GPR101Q96P66 508 aaPredicted RBP11.71□□□□□ -0.53
SNX20-201ENST00000300590 CYTH2Q99418 400 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.53
SNX20-201ENST00000300590 DNM3Q9UQ16 869 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 ATP5HO75947 161 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
SNX20-201ENST00000300590 SETSIPP0DME0 302 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 YY1P25490 414 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 POLD1P28340 1107 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 FMO5P49326 533 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 IRGCQ6NXR0 463 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 CATSPER3Q86XQ3 398 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 CCDC125Q86Z20 511 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 AGPAT1Q99943 283 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 CCDC77Q9BR77 488 aa11.71□□□□□ -0.53
SNX20-201ENST00000300590 NCANO14594 1321 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 CDH16O75309 829 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 TBX10O75333 385 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 DCTN3O75935 186 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 BAG2O95816 211 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 KCNQ4P56696 695 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 HS2ST1Q7LGA3 356 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 NLRP9Q7RTR0 991 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 MYCT1Q8N699 235 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 GRAMD1AQ96CP6 724 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 MIPEPQ99797 713 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 TRAF3IP3Q9Y228 551 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.54
SNX20-201ENST00000300590 ASTN1O14525 1302 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 EXOC1LA0A1B0GW35 172 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 GYG2O15488 501 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 ATF2P15336 505 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 RPA3P35244 121 aaPredicted RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 YARSP54577 528 aaKnown RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 GPC5P78333 572 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 SGSM1Q2NKQ1 1148 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 C4orf50Q6ZRC1 276 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 RHOT2Q8IXI1 618 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 FAM81AQ8TBF8 368 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 FBXO41Q8TF61 875 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 INTS2Q9H0H0 1204 aaKnown RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 PSTPIP2Q9H939 334 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 TYW1Q9NV66 732 aaKnown RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNX20-201ENST00000300590 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNX20-201ENST00000300590 WASF2Q9Y6W5 498 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 GOLGA8RI6L899 631 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 PDXKO00764 312 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 NTSR2O95665 410 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 HSPA6P17066 643 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 NEK3P51956 506 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 SLC12A3P55017 1021 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
SNX20-201ENST00000300590 LRRC36Q1X8D7 754 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 ZFYVE27Q5T4F4 411 aa11.7□□□□□ -0.54
SNX20-201ENST00000300590 ISLR2Q6UXK2 745 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms