RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CASP5P51878 434 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 PTENP60484 403 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 RIPK1Q13546 671 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 C16orf86Q6ZW13 317 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 RBM46Q8TBY0 533 aaKnown RBP15.86■□□□□ 0.13
SPIDR-201ENST00000297423 PICK1Q9NRD5 415 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 PIM2Q9P1W9 311 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 EP400Q96L91 3159 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 KIAA0391O15091 583 aaKnown RBP15.86■□□□□ 0.13
SPIDR-201ENST00000297423 ECM1Q16610 540 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 C2CD6Q53TS8 623 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 RNF207Q6ZRF8 634 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 STK32AQ8WU08 396 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 SCFD1Q8WVM8 642 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 PGM2Q96G03 612 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 TBC1D10AQ9BXI6 508 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 ZNF277Q9NRM2 450 aaPredicted RBP15.86■□□□□ 0.13
SPIDR-201ENST00000297423 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 SLC4A7Q9Y6M7 1214 aa15.86■□□□□ 0.13
SPIDR-201ENST00000297423 RSPH10B2B2RC85 870 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 PAEPP09466 180 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 RSPH10BP0C881 870 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 COMTP21964 271 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 CACNA2D1P54289 1103 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 KCNA1Q09470 495 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 BNIP1Q12981 228 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 CDCA2Q69YH5 1023 aaPredicted RBP15.85■□□□□ 0.13
SPIDR-201ENST00000297423 IRF2BP2Q7Z5L9 587 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 PPM1KQ8N3J5 372 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 TMEM165Q9HC07 324 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 FAM187AA6NFU0 413 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 NR3C1P04150 777 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 USH1GQ495M9 461 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.85■□□□□ 0.13
SPIDR-201ENST00000297423 ECHDC2Q86YB7 292 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 SNRNP27Q8WVK2 155 aaKnown RBP15.85■□□□□ 0.13
SPIDR-201ENST00000297423 EZH1Q92800 747 aaPredicted RBP15.85■□□□□ 0.13
SPIDR-201ENST00000297423 BHMT2Q9H2M3 363 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 ACP6Q9NPH0 428 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 AIPL1Q9NZN9 384 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 PFASO15067 1338 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 IGSF9BQ9UPX0 1349 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 BAZ2AQ9UIF9 1905 aaKnown RBP15.85■□□□□ 0.13
SPIDR-201ENST00000297423 MAP3K7O43318 606 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 TAF1BQ53T94 588 aaPredicted RBP15.85■□□□□ 0.13
SPIDR-201ENST00000297423 SNX30Q5VWJ9 437 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 CWF19L1Q69YN2 538 aaKnown RBP15.85■□□□□ 0.13
SPIDR-201ENST00000297423 CPNE8Q86YQ8 564 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 TPH2Q8IWU9 490 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 NEDD1Q8NHV4 660 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 BCAS3Q9H6U6 928 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 PHTF1Q9UMS5 762 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 FRMD4BQ9Y2L6 1034 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 PODXLO00592 558 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 AHCYL1O43865 530 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 PHF2O75151 1096 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 AKAP3O75969 853 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 DUPD1Q68J44 220 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 CCDC62Q6P9F0 684 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 CCDC125Q86Z20 511 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 ANKRD35Q8N283 1001 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 FAM13CQ8NE31 585 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 HAUS1Q96CS2 278 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 CEP63Q96MT8 703 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 FAM161BQ96MY7 647 aa15.85■□□□□ 0.13
SPIDR-201ENST00000297423 KLHL33A6NCF5 533 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 CREB3O43889 395 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 KRT5P13647 590 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 SSTR3P32745 418 aaPredicted RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 GRM4Q14833 912 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 PPP2R5EQ16537 467 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 KCTD1Q719H9 257 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 ARHGAP22Q7Z5H3 698 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 MTDHQ86UE4 582 aaKnown RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 ZNF653Q96CK0 615 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 SH3GLB2Q9NR46 395 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 ZBTB21Q9ULJ3 1066 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 CCDC88AQ3V6T2 1871 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 ARHGAP42A6NI28 874 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 CHRNA3P32297 505 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 SCNN1BP51168 640 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 ROR2Q01974 943 aaKnown RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 C6orf163Q5TEZ5 329 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 GALNT17Q6IS24 598 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 TEX9Q8N6V9 391 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 CENPTQ96BT3 561 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 MKNK1Q9BUB5 465 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 RGL1Q9NZL6 768 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 AJAP1Q9UKB5 411 aaPredicted RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 UNC5CO95185 931 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 GAS8O95995 478 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 DHX34Q14147 1143 aaKnown RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 DLGAP5Q15398 846 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 ZC2HC1CQ53FD0 456 aaPredicted RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 DALRD3Q5D0E6 543 aaKnown RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 PALB2Q86YC2 1186 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 LRRC57Q8N9N7 239 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 C1orf131Q8NDD1 294 aaKnown RBP15.84■□□□□ 0.13
SPIDR-201ENST00000297423 SLC30A5Q8TAD4 765 aa15.84■□□□□ 0.13
SPIDR-201ENST00000297423 ATP8B4Q8TF62 1192 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms