RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 C10orf76Q5T2E6 689 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 SLC30A5Q8TAD4 765 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 PSPC1Q8WXF1 523 aaKnown RBP15.18■□□□□ 0.02
ABCF3-201ENST00000292808 EXOC4Q96A65 974 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 TMEM134Q9H6X4 195 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 DAAM1Q9Y4D1 1078 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 BTNL10A8MVZ5 291 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 EXTL3O43909 919 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 RFX1P22670 979 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
ABCF3-201ENST00000292808 STRN3Q13033 797 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 CDCA2Q69YH5 1023 aaPredicted RBP15.18■□□□□ 0.02
ABCF3-201ENST00000292808 C15orf39Q6ZRI6 1047 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 SPATA4Q8NEY3 305 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 TAS1R2Q8TE23 839 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 ZNF516Q92618 1163 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 KREMEN1Q96MU8 473 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 TMEM8AQ9HCN3 771 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 UBE2TQ9NPD8 197 aaPredicted RBP15.18■□□□□ 0.02
ABCF3-201ENST00000292808 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.18■□□□□ 0.025e-6■■■■■ 31.1
ABCF3-201ENST00000292808 PCDHGC5Q9Y5F6 944 aa15.18■□□□□ 0.02
ABCF3-201ENST00000292808 DOCK3Q8IZD9 2030 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 IGF2BP3O00425 579 aaKnown RBP eCLIP15.17■□□□□ 0.02
ABCF3-201ENST00000292808 SCP2P22307 547 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 ANXA13P27216 316 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 PAFAH1B1P43034 410 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 HUNKP57058 714 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 KIF22Q14807 665 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 PTPROQ16827 1216 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 IER5Q5VY09 327 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 KRT39Q6A163 491 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 ELMO3Q96BJ8 720 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 MAML3Q96JK9 1138 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 GOLPH3Q9H4A6 298 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 MED4Q9NPJ6 270 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 ADAM21Q9UKJ8 722 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 EVPLQ92817 2033 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 TMCO5BA8MYB1 307 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 LGALS2P05162 132 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 GJB1P08034 283 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 AARSP49588 968 aaKnown RBP eCLIP15.17■□□□□ 0.02
ABCF3-201ENST00000292808 SLC26A2P50443 739 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 CLDN10P78369 228 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 ENPEPQ07075 957 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 LAMTOR4Q0VGL1 99 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 SV2AQ7L0J3 742 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 RASAL3Q86YV0 1011 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 GLYCTKQ8IVS8 523 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 NPLOC4Q8TAT6 608 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 FAM71BQ8TC56 605 aa15.17■□□□□ 0.02
ABCF3-201ENST00000292808 AGO2Q9UKV8 859 aaKnown RBP15.17■□□□□ 0.02
ABCF3-201ENST00000292808 ZSWIM8A7E2V4 1837 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 A0A0B4J269 797 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 MSCO60682 206 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 H2AFZP0C0S5 128 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 DLATP10515 647 aaKnown RBP15.16■□□□□ 0.02
ABCF3-201ENST00000292808 ACOT2P49753 483 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 GPC3P51654 580 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 LAMC2Q13753 1193 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 MEI1Q5TIA1 1274 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 H2AFVQ71UI9 128 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 PLEKHH3Q7Z736 793 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 PALB2Q86YC2 1186 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 HELQQ8TDG4 1101 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 CPA4Q9UI42 421 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 ATP8B3O60423 1300 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 CCDC66A2RUB6 948 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 ZNF233A6NK53 670 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 ADCY6O43306 1168 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 FAM189A1O60320 539 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 GH1P01241 217 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 GTF2H1P32780 548 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 CETN1Q12798 172 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 PSMD6Q15008 389 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 GSPT2Q8IYD1 628 aaKnown RBP15.16■□□□□ 0.02
ABCF3-201ENST00000292808 AFG1LQ8WV93 481 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 EMID1Q96A84 441 aaPredicted RBP15.16■□□□□ 0.02
ABCF3-201ENST00000292808 LRRC1Q9BTT6 524 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 SEPT11Q9NVA2 429 aaKnown RBP15.16■□□□□ 0.02
ABCF3-201ENST00000292808 ANKFY1Q9P2R3 1169 aa15.16■□□□□ 0.02
ABCF3-201ENST00000292808 ABLIM1O14639 778 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 HBP1O60381 514 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 C22orf31O95567 290 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 RNASE9P60153 205 aaKnown RBP15.15■□□□□ 0.02
ABCF3-201ENST00000292808 HSP90B2PQ58FF3 399 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 LMBRD2Q68DH5 695 aaPredicted RBP15.15■□□□□ 0.02
ABCF3-201ENST00000292808 PPTC7Q8NI37 304 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 HDAC7Q8WUI4 952 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 SLC20A1Q8WUM9 679 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 GAS2O43903 313 aaKnown RBP15.15■□□□□ 0.02
ABCF3-201ENST00000292808 SRGAP2CP0DJJ0 459 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 SMPD1P17405 629 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 CFAP221Q4G0U5 840 aa15.15■□□□□ 0.02
ABCF3-201ENST00000292808 GLE1Q53GS7 698 aaKnown RBP15.15■□□□□ 0.02
ABCF3-201ENST00000292808 DPP9Q86TI2 863 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms