RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PDIA6Q15084 440 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 DEPDC1Q5TB30 811 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF564Q8TBZ8 553 aaPredicted RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 CCT8L2Q96SF2 557 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 MXD3Q9BW11 206 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 EPN3Q9H201 632 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 ASNSD1Q9NWL6 643 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 PCSK1NQ9UHG2 260 aa11.36□□□□□ -0.59
PKNOX1-201ENST00000291547 ENO1P06733 434 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 SRGAP2CP0DJJ0 459 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 KCNA2P16389 499 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 PLEKHM3Q6ZWE6 761 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 THNSL1Q8IYQ7 743 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 SPATA4Q8NEY3 305 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF212Q9UDV6 495 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ITM2BQ9Y287 266 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 CDHR2Q9BYE9 1310 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 TOPAZ1Q8N9V7 1692 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 S100A5P33763 92 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 KCNH2Q12809 1159 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 FASTKD1Q53R41 847 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 E4F1Q66K89 784 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 PLD3Q8IV08 490 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 DDIASQ8IXT1 998 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 SH2D3CQ8N5H7 860 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 PXDNLA1KZ92 1463 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 TTC26A0AVF1 554 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ARHGEF37A1IGU5 675 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 EFCAB14O75071 495 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ALDH18A1P54886 795 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 CYLC2Q14093 348 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 NAALADL2Q58DX5 795 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 IZUMO3Q5VZ72 239 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 SLFN12LQ6IEE8 588 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 DPP9Q86TI2 863 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 RNF135Q8IUD6 432 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 LCORLQ8N3X6 602 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF473Q8WTR7 871 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 PPP1R16BQ96T49 567 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 MAGEB5Q9BZ81 275 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 PUS7LQ9H0K6 701 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 CASS4Q9NQ75 786 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 STMN3Q9NZ72 180 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 SERPINB13Q9UIV8 391 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 F5H423 210 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 IRAK1P51617 712 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 BYSLQ13895 437 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 GJC2Q5T442 439 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 TBC1D9BQ66K14 1250 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 RINLQ6ZS11 566 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 NDUFAF2Q8N183 169 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF280CQ8ND82 737 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ZKSCAN4Q969J2 545 aaPredicted RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 PBXIP1Q96AQ6 731 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 SNF8Q96H20 258 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 GJB4Q9NTQ9 266 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 GIMAP4Q9NUV9 329 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 ADD3Q9UEY8 706 aaKnown RBP11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 AMACRQ9UHK6 382 aa11.35□□□□□ -0.59
PKNOX1-201ENST00000291547 C16orf96A6NNT2 1141 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PRR23D1E9PI22 279 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 ADCY3O60266 1144 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 NR3C1P04150 777 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 ATP1A1P05023 1023 aaKnown RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 CALB1P05937 261 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PRR23D2P0DMB1 279 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 ANXA13P27216 316 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 CCDC15Q0P6D6 951 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 MXD4Q14582 209 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 TMEM270Q6UE05 265 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PDCD6IPQ8WUM4 868 aaKnown RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 EGFL8Q99944 293 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 SLC8A2Q9UPR5 921 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PIK3R2O00459 728 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 TEX33O43247 280 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 GDF11O95390 407 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PRCPP42785 496 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 ITPK1Q13572 414 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 MDH1BQ5I0G3 518 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF746Q6NUN9 644 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DDX42Q86XP3 938 aaKnown RBP eCLIP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 PROM2Q8N271 834 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 AGGF1Q8N302 714 aaeCLIP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 EME1Q96AY2 570 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 FAM53CQ9NYF3 392 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 RPAP1Q9BWH6 1393 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 A0A1B0GW55 424 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
PKNOX1-201ENST00000291547 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms