RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PIAS1O75925 651 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 POLR2BP30876 1174 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 CIITAP33076 1130 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 PEX19P40855 299 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 MSH2P43246 934 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 SEPT6Q14141 434 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 MAP7D1Q3KQU3 841 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 TKFCQ3LXA3 575 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ZNF667Q5HYK9 610 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 LRRN4Q8WUT4 740 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 BLOC1S4Q9NUP1 217 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 HOXC10Q9NYD6 342 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CPP00450 1065 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 TXNP10599 105 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 PDE1BQ01064 536 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 SLMAPQ14BN4 828 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 RYBPQ8N488 228 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 SMC1BQ8NDV3 1235 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 TRAPPC12Q8WVT3 735 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 NYAP2Q9P242 653 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 LAMA4Q16363 1823 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 GLI1P08151 1106 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 KRT10P13645 584 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 PHBP35232 272 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ARSEP51690 589 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 STAT5BP51692 787 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 SLC12A1Q13621 1099 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CCDC14Q49A88 953 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 FAXCQ5TGI0 409 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ALS2CLQ60I27 953 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 TWF2Q6IBS0 349 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 PRUNE1Q86TP1 453 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 RFFLQ8WZ73 363 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 KAT5Q92993 513 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 KIF12Q96FN5 646 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ZDHHC15Q96MV8 337 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 AGAP3Q96P47 875 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 MRPL47Q9HD33 250 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 TUFT1Q9NNX1 390 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ABT1Q9ULW3 272 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 RHBDL3P58872 404 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 BPIFB4P59827 614 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 NAB2Q15742 525 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 EMBQ6PCB8 327 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 RSRC2Q7L4I2 434 aaKnown RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 C4orf33Q8N1A6 199 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 TATDN2Q93075 761 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 CYTH2Q99418 400 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 RIOX1Q9H6W3 641 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 C10orf88Q9H8K7 445 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 SUCLA2Q9P2R7 463 aaPredicted RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 FAM198AQ9UFP1 575 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 ALG6Q9Y672 507 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 SCN11AQ9UI33 1791 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 PPFIA4O75335 1185 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 VTNP04004 478 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 IL1R1P14778 569 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 KRT76Q01546 638 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 PDIA2Q13087 525 aaKnown RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 LY6KQ17RY6 165 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 TRAPPC11Q7Z392 1133 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 RHOT2Q8IXI1 618 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 MICAL1Q8TDZ2 1067 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 MAIP1Q8WWC4 291 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 PSPC1Q8WXF1 523 aaKnown RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 STK33Q9BYT3 514 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 LMO7Q8WWI1 1683 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 SPDYE2BA6NHP3 402 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 SPDYE6P0CI01 402 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 YWHAEP62258 255 aaKnown RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 RNASELQ05823 741 aaKnown RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 TRADDQ15628 312 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 FBXO16Q8IX29 292 aaPredicted RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 DEPDC1BQ8WUY9 529 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 FAM151AQ8WW52 585 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 ZBTB45Q96K62 511 aaPredicted RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 MTMR12Q9C0I1 747 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 SIK2Q9H0K1 926 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 TAS2R14Q9NYV8 317 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 PPP1R11O60927 126 aaPredicted RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 CIB2O75838 187 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 ZBED1O96006 694 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 GTF2H1P32780 548 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 CAP2P40123 477 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 PPATQ06203 517 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 AP1B1Q10567 949 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 NCOA4Q13772 614 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 EMC2Q15006 297 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 P3H1Q32P28 736 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 CBWD6Q4V339 395 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 CBWD3Q5JTY5 395 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 CBWD5Q5RIA9 395 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 TPCN2Q8NHX9 752 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 HAS1Q92839 578 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 CDHR1Q96JP9 859 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 PIH1D1Q9NWS0 290 aaKnown RBP5.09□□□□□ -1.59
UBR1-201ENST00000290650 NAGPAQ9UK23 515 aa5.09□□□□□ -1.59
UBR1-201ENST00000290650 CHD4Q14839 1912 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 SYNGAP1Q96PV0 1343 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 ANO9A1A5B4 782 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms