RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 AKR1A1P14550 325 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 PAX7P23759 505 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 CCND1P24385 295 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 TRIP13Q15645 432 aaPredicted RBP12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 SRRM1Q8IYB3 904 aaKnown RBP12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 PDZD8Q8NEN9 1154 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 FAM81BQ96LP2 452 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 OLFM3Q96PB7 478 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 CHP1Q99653 195 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 TIPINQ9BVW5 301 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 VWA5AO00534 786 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 ANKRD20A8PQ5CZ79 823 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 ANKRD20A2Q5SQ80 823 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 ANKRD20A1Q5TYW2 823 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 FOXR1Q6PIV2 292 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 AFAP1L2Q8N4X5 818 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 TUFT1Q9NNX1 390 aa12.11□□□□□ -0.47
NPC1L1-201ENST00000289547 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 YWHAGP61981 247 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 CDR2Q01850 454 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 SPARCL1Q14515 664 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 RHPN2Q8IUC4 686 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 RNPC3Q96LT9 517 aaKnown RBP12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 ZFP69BQ9UJL9 534 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 SLC15A5A6NIM6 579 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 SLC26A4O43511 780 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 DNAJC6O75061 913 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 PTGISQ16647 500 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 BSPRYQ5W0U4 402 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 KAZNQ674X7 775 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 RASGRP2Q7LDG7 609 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 LXNQ9BS40 222 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 SNX25Q9H3E2 840 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 STARD7Q9NQZ5 370 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 RAB20Q9NX57 234 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 MAD2L2Q9UI95 211 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 SNX12Q9UMY4 172 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 C10orf71Q711Q0 1435 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 HBP1O60381 514 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 MGEA5O60502 916 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 BRAFP15056 766 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 BFSP1Q12934 665 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 CATSPERGQ6ZRH7 1159 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 LRRN4CLQ8ND94 238 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 TEKT4Q8WW24 435 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 PGBD4Q96DM1 585 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 RIT2Q99578 217 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 RNF208Q9H0X6 261 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 DLGAP2Q9P1A6 1054 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 C17orf102A2RUQ5 167 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 ADCY3O60266 1144 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 PIK3CAP42336 1068 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 MAML1Q92585 1016 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 GJA10Q969M2 543 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 GCNAQ96QF7 691 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 TAAR1Q96RJ0 339 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
NPC1L1-201ENST00000289547 NR2F2P24468 414 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PMS2P54278 862 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 MRPS35P82673 323 aaKnown RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 KIF2BQ8N4N8 673 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 MSTO1Q9BUK6 570 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 KIAA1586Q9HCI6 787 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 TRIM10Q9UDY6 481 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PLCG1P19174 1290 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PSMC2P35998 433 aaKnown RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 EFNA5P52803 228 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PRMT2P55345 433 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PEX3P56589 373 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 DEUP1Q05D60 604 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 ZBTB33Q86T24 672 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PFDN4Q9NQP4 134 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 FGFR1OP2Q9NVK5 253 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 ASAP2O43150 1006 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 CRCPO75575 148 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 MT-ND3P03897 115 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 RFC5P40937 340 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 CUL4BQ13620 913 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 SHC4Q6S5L8 630 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 CCT6BQ92526 530 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 CCDC127Q96BQ5 260 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 TRIM55Q9BYV6 548 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 PACSIN2Q9UNF0 486 aaPredicted RBP12.09□□□□□ -0.47
NPC1L1-201ENST00000289547 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms