RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ING2Q9H160 280 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 E9PMD0 336 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 LDHAP00338 332 aaKnown RBP18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 HSD17B3P37058 310 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 C16orf89Q6UX73 402 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 ERP27Q96DN0 273 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 PAPOLBQ9NRJ5 636 aaKnown RBP18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 FAM205CA6NFA0 338 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 C16orf96A6NNT2 1141 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 PDXKO00764 312 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 C21orf2O43822 256 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 PRPSAP2O60256 369 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 RTN2O75298 545 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 SERPINB3P29508 390 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 DSG1Q02413 1049 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 NCAPHQ15003 741 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 LRRC14Q15048 493 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 KYNUQ16719 465 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 SLFN12LQ6IEE8 588 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 CRELD2Q6UXH1 353 aaPredicted RBP18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 SFR1Q86XK3 245 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 NAF1Q96HR8 494 aaKnown RBP18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 DCTN4Q9UJW0 460 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 ANGPTL3Q9Y5C1 460 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 KRT17Q04695 432 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 PREPLQ4J6C6 727 aaPredicted RBP18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 LCA5Q86VQ0 697 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 FAF2Q96CS3 445 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 TSSK1BQ9BXA7 367 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
PCDHA13-201ENST00000289272 KRT7P08729 469 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 TMED10P49755 219 aaKnown RBP18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 SF3B3Q15393 1217 aaKnown RBP18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 PIGOQ8TEQ8 1089 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L15C9J2P7 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L13C9JLJ4 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L11C9JVI0 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L18D6R9N7 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L22D6RA61 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L17D6RBQ6 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L19D6RCP7 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L20D6RJB6 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 ARHGDIAP52565 204 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 SEC24CP53992 1094 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L24Q0WX57 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 SPOPLQ6IQ16 392 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L6PQ6QN14 398 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 BARGINQ6ZT62 677 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 NUP85Q9BW27 656 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 USP17L10C9JJH3 530 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 ZBTB24O43167 697 aaPredicted RBP18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 CARSP49589 748 aaKnown RBP18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 TMCO5AQ8N6Q1 288 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 MAGEB18Q96M61 343 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 PABPC3Q9H361 631 aaKnown RBP18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 SMYD3Q9H7B4 428 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 KIF9Q9HAQ2 790 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 PKD2L2Q9NZM6 624 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 ATF5Q9Y2D1 282 aaPredicted RBP18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 TMCC1O94876 653 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 NPEPPSP55786 919 aa18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 PROCA1Q8NCQ7 364 aaPredicted RBP18.54■□□□□ 0.56
PCDHA13-201ENST00000289272 NLRP11P59045 1033 aaKnown RBP18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 CENPCQ03188 943 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 RAPGEF5Q92565 580 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 BTBD6Q96KE9 485 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 OSBPL8Q9BZF1 889 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 HERC5Q9UII4 1024 aaKnown RBP18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 AKT3Q9Y243 479 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 ZNF233A6NK53 670 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 TMEM253P0C7T8 217 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 SERPINB9P50453 376 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 EDRF1Q3B7T1 1238 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 RABGAP1LQ5R372 815 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 METTL23Q86XA0 190 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 RNF169Q8NCN4 708 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 INTS2Q9H0H0 1204 aaKnown RBP18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 GH2P01242 217 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 ANKRD40Q6AI12 368 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 LRRC43Q8N309 656 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 SENP2Q9HC62 589 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 FNTAP49354 379 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 SNAP25P60880 206 aa18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 THOC5Q13769 683 aaKnown RBP18.53■□□□□ 0.56
PCDHA13-201ENST00000289272 IL10P22301 178 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 JAMLQ86YT9 394 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 MTBPQ96DY7 904 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 CARD9Q9H257 536 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 ADAM22Q9P0K1 906 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 WARS2Q9UGM6 360 aaKnown RBP18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 POTEB3A0JP26 581 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TMEM120BA0PK00 339 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 POTECB2RU33 542 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TNFRSF8P28908 595 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 POTEBQ6S5H4 581 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TBC1D22BQ9NU19 505 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 ATP8B3O60423 1300 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 TDP2O95551 362 aa18.52■□□□□ 0.56
PCDHA13-201ENST00000289272 EPHB1P54762 984 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms