RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 RSPH1Q8WYR4 309 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 APBB2Q92870 758 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 FAM49AQ9H0Q0 323 aaPredicted RBP9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 PDZD7Q9H5P4 517 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 SAMSN1Q9NSI8 373 aaKnown RBP9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 BRWD1Q9NSI6 2320 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 ANKRD63C9JTQ0 380 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 FAM189A1O60320 539 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 KIAA1328Q86T90 577 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 ANK1P16157 1881 aa9.16□□□□□ -0.94
PTPDC1-201ENST00000288976 N4BP1O75113 896 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 SELPP16109 830 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 RAB27AP51159 221 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 CLDN10P78369 228 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 FANCCQ00597 558 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 APTXQ7Z2E3 356 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 NECAB2Q7Z6G3 386 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 TRIM59Q8IWR1 403 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 CD302Q8IX05 232 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 TRMT13Q9NUP7 481 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 RNF216Q9NWF9 866 aaPredicted RBP9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 ITIH6Q6UXX5 1313 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 INO80B-WBP1J3KQ70 363 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 IL18RAPO95256 599 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 CHRNA1P02708 482 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 EDN1P05305 212 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 UQCRHP07919 91 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 FBXO47Q5MNV8 452 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 SLC27A1Q6PCB7 646 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 NT5DC4Q86YG4 428 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 MINDY3Q9H8M7 445 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 POLD4Q9HCU8 107 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 USP20Q9Y2K6 914 aa9.15□□□□□ -0.94
PTPDC1-201ENST00000288976 A0A1W2PQC6 194 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 GTPBP10A4D1E9 387 aaKnown RBP9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 CKBP12277 381 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 COPB1P53618 953 aaKnown RBP9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 KRT31Q15323 416 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 HSP90B2PQ58FF3 399 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM186BQ8IYM0 893 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 ZBTB10Q96DT7 871 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 IMPG2Q9BZV3 1241 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 ERVK-5Q9HDB9 667 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 AGO2Q9UKV8 859 aaKnown RBP9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 DERAQ9Y315 318 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 LGALS16A8MUM7 142 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 DCDC2CA8MYV0 355 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 OGTO15294 1046 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 CLDN3O15551 220 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 IQCF3P0C7M6 154 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 SKIP12755 728 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 THPOP40225 353 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 GRM5P41594 1212 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 CDR1P51861 262 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 PSMD6Q15008 389 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 KIZQ2M2Z5 673 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 FAM228AQ86W67 206 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 POMGNT1Q8WZA1 660 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 MSTO1Q9BUK6 570 aa9.15□□□□□ -0.95
PTPDC1-201ENST00000288976 TRIP12Q14669 1992 aaPredicted RBP9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 ZNF75DP51815 510 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 ARID5AQ03989 594 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 WNT8BQ93098 351 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 ADPGKQ9BRR6 497 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 FTHL17Q9BXU8 183 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 ARMCX3Q9UH62 379 aaPredicted RBP9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 COL4A6Q14031 1691 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 EXOC3O60645 756 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 AKAP3O75969 853 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 KRT13P13646 458 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 CYP24A1Q07973 514 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 BFSP1Q12934 665 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 NR1I3Q14994 352 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 SNRNP35Q16560 246 aaKnown RBP9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 VWA3BQ502W6 1294 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 MIIPQ5JXC2 388 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 FKBP15Q5T1M5 1219 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 CCDC117Q8IWD4 279 aaPredicted RBP9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 BRSK2Q8IWQ3 736 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 OSMRQ99650 979 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 CBWD1Q9BRT8 395 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 TUBGCP2Q9BSJ2 902 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 RPS6KA5O75582 802 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 ZNF568Q3ZCX4 644 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 LRRC8DQ7L1W4 858 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 CATSPER4Q7RTX7 472 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 TARS2Q9BW92 718 aaKnown RBP9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 HAPLN2Q9GZV7 340 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 PLEKHA5Q9HAU0 1116 aa9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 CPSF3Q9UKF6 684 aaKnown RBP9.14□□□□□ -0.95
PTPDC1-201ENST00000288976 ALPK3Q96L96 1907 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 ZNF233A6NK53 670 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 INPPL1O15357 1258 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 ZBTB24O43167 697 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 CXCL10P02778 98 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 CLTAP09496 248 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 ARF4P18085 180 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 HOXA11P31270 313 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 PBX1P40424 430 aa9.13□□□□□ -0.95
PTPDC1-201ENST00000288976 PAK2Q13177 524 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms