RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 GADL1Q6ZQY3 521 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 NSMCE1Q8WV22 266 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 CCDC138Q96M89 665 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 MSTO1Q9BUK6 570 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 KIF9Q9HAQ2 790 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 MT-ND3P03897 115 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 CNGA1P29973 690 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 YWHABP31946 246 aaKnown RBP13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 BASP1P80723 227 aaKnown RBP13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 AMPD2Q01433 879 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 TRADDQ15628 312 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 BBS9Q3SYG4 887 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 SAYSD1Q9NPB0 183 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 AGPAT3Q9NRZ7 376 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 TMEM150BA6NC51 233 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 WDR64B1ANS9 1081 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 ZNF263O14978 683 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SPAG7O75391 227 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 POLD1P28340 1107 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 KCNMA1Q12791 1236 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 LONRF1Q17RB8 773 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 KRT39Q6A163 491 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 KIF2BQ8N4N8 673 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 CBWD1Q9BRT8 395 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SLC40A1Q9NP59 571 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 MED1Q15648 1581 aaPredicted RBP13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 PITPNM2Q9BZ72 1349 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 H7C0C1 242 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 PODXLO00592 558 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SH3BP5O60239 455 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 BRAFP15056 766 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 NCF2P19878 526 aaPredicted RBP13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 ATP5OP48047 213 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SLC12A2P55011 1212 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 DEUP1Q05D60 604 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SYCP2LQ5T4T6 812 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 STRIP1Q5VSL9 837 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 MAP7D3Q8IWC1 876 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 NME8Q8N427 588 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 TTLL6Q8N841 843 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 BBOF1Q8ND07 529 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 CFAP73A6NFT4 308 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 RASA4BC9J798 803 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 EML1O00423 815 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 RASA4O43374 803 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 PCYT1AP49585 367 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 CDK17Q00537 523 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 IL1RL1Q01638 556 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 KLC1Q07866 573 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SLC20A1Q8WUM9 679 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 C9orf72Q96LT7 481 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 NLRP4Q96MN2 994 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 POP1Q99575 1024 aaKnown RBP13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 DCTN3O75935 186 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 EEF1DP29692 281 aaKnown RBP13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 LRRC55Q6ZSA7 311 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 JAMLQ86YT9 394 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 ZBTB8OSQ8IWT0 167 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 CYFIP2Q96F07 1278 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 SUGT1Q9Y2Z0 365 aa13.34□□□□□ -0.27
SLC6A1-201ENST00000287766 TISP43B9A030 160 aa13.33□□□□□ -0.27
SLC6A1-201ENST00000287766 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.27
SLC6A1-201ENST00000287766 RFX6Q8HWS3 928 aa13.33□□□□□ -0.27
SLC6A1-201ENST00000287766 ISCUQ9H1K1 167 aa13.33□□□□□ -0.27
SLC6A1-201ENST00000287766 SYF2O95926 243 aaKnown RBP13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 MYBL1P10243 752 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 KRT17Q04695 432 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC29A2Q14542 456 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 SMAD1Q15797 465 aaKnown RBP13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 TTC17Q96AE7 1141 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 C18orf8Q96DM3 657 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 LRGUKQ96M69 825 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 FAM161BQ96MY7 647 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 SMYD2Q9NRG4 433 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 ZHX2Q9Y6X8 837 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 CFAP69A5D8W1 941 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 TOM1L1O75674 476 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 TNNC2P02585 160 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 IL1R1P14778 569 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 YARSP54577 528 aaKnown RBP13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 KRT81Q14533 505 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 CDO1Q16878 200 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 JADE1Q6IE81 842 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 FBXL13Q8NEE6 735 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 SNRNP27Q8WVK2 155 aaKnown RBP13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 PRMT1Q99873 361 aaKnown RBP13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 UNC45AQ9H3U1 944 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 KCNH7Q9NS40 1196 aa13.33□□□□□ -0.28
SLC6A1-201ENST00000287766 DLGAP2Q9P1A6 1054 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms