RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 HLA-DRAP01903 254 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 LAMC2Q13753 1193 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 NTRK3Q16288 839 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 TAF1BQ53T94 588 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 NBPF12Q5TAG4 269 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 ATF7IP2Q5U623 682 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 BTBD8Q5XKL5 378 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 NDUFAF2Q8N183 169 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 TC2NQ8N9U0 490 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 PDCD6IPQ8WUM4 868 aaKnown RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 KLHL29Q96CT2 875 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 NUDT12Q9BQG2 462 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 EPC1Q9H2F5 836 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 BFARQ9NZS9 450 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 UVRAGQ9P2Y5 699 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 SNX12Q9UMY4 172 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 FAM205AQ6ZU69 1335 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 TCRBV5S4A2TA0A5A2 114 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 CASQ2O14958 399 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 RGL2O15211 777 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 PPARGP37231 505 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 KCNJ6P48051 423 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 CLNS1AP54105 237 aaKnown RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 CCZ1BP86790 482 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 CCZ1P86791 482 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 MUM1Q2TAK8 710 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 MOXD1Q6UVY6 613 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 ELOA2Q8IYF1 753 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-201ENST00000277575 AMACRQ9UHK6 382 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 HPCAL4Q9UM19 191 aa11.96□□□□□ -0.49
USP6NL-201ENST00000277575 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 CLGNO14967 610 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 ZWINTO95229 277 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 APOEP02649 317 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 LCP1P13796 627 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 PAMP19021 973 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 TOB1P50616 345 aaPredicted RBP11.96□□□□□ -0.5
USP6NL-201ENST00000277575 CDK17Q00537 523 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 TTC25Q96NG3 672 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 TAF1DQ9H5J8 278 aaPredicted RBP11.96□□□□□ -0.5
USP6NL-201ENST00000277575 WDR35Q9P2L0 1181 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 PCDHB2Q9Y5E7 798 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 SLIT1O75093 1534 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 VWDEQ8N2E2 1590 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 COPEO14579 308 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 KRT14P02533 472 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 SREBF1P36956 1147 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 SESN3P58005 492 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 GRB10Q13322 594 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 STILQ15468 1287 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 KLC3Q6P597 504 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 RASGRP2Q7LDG7 609 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 SRRM1Q8IYB3 904 aaKnown RBP11.96□□□□□ -0.5
USP6NL-201ENST00000277575 UBE2Q2Q8WVN8 375 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 CPA5Q8WXQ8 436 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.5
USP6NL-201ENST00000277575 PPP1R9AQ9ULJ8 1098 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.96□□□□□ -0.5
USP6NL-201ENST00000277575 MRFAP1Q9Y605 127 aa11.96□□□□□ -0.5
USP6NL-201ENST00000277575 H3BRJ5 948 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 PDGFRAP16234 1089 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 TCF7P36402 384 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-201ENST00000277575 NOP14P78316 857 aaKnown RBP11.95□□□□□ -0.5
USP6NL-201ENST00000277575 RAD9BQ6WBX8 426 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 ZC3H18Q86VM9 953 aaKnown RBP11.95□□□□□ -0.5
USP6NL-201ENST00000277575 APPL2Q8NEU8 664 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 TTC17Q96AE7 1141 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 UNC45AQ9H3U1 944 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 C17orf75Q9HAS0 396 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 TMEM8AQ9HCN3 771 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 G3BP2Q9UN86 482 aaKnown RBP11.95□□□□□ -0.5
USP6NL-201ENST00000277575 RPS6KA5O75582 802 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 GYPCP04921 128 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 SLC1A1P43005 524 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 RGS7P49802 495 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 SPARCL1Q14515 664 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 FAM83AQ86UY5 434 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 PPM1NQ8N819 430 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 PRPF31Q8WWY3 499 aaKnown RBP11.95□□□□□ -0.5
USP6NL-201ENST00000277575 AGXT2Q9BYV1 514 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 SALL1Q9NSC2 1324 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 NWD1Q149M9 1564 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 MED24O75448 989 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 ARP10275 920 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 SERPINB6P35237 376 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 PAPOLAP51003 745 aaKnown RBP11.95□□□□□ -0.5
USP6NL-201ENST00000277575 PMS2P54278 862 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 SNRPFP62306 86 aaKnown RBP11.95□□□□□ -0.5
USP6NL-201ENST00000277575 ROR1Q01973 937 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 SLC12A1Q13621 1099 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 VEPH1Q14D04 833 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 DGKDQ16760 1214 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 MMS22LQ6ZRQ5 1243 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 ELMOD1Q8N336 334 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 SLC35G2Q8TBE7 412 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms