RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 PCDHA1Q9Y5I3 950 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 SF3B1O75533 1304 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 IFNA14P01570 189 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RARGP13631 454 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PAX3P23760 479 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PEX5P50542 639 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 SKOR1P84550 965 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 DARS2Q6PI48 645 aaKnown RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 KIAA2013Q8IYS2 634 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 S100ZQ8WXG8 99 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 QKIQ96PU8 341 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 TINF2Q9BSI4 451 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 IFNAR2P48551 515 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ACTN3Q08043 901 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ULK2Q8IYT8 1036 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 CYFIP2Q96F07 1278 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 C7orf25Q9BPX7 421 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 KATNAL1Q9BW62 490 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 GANQ9H2C0 597 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 SUPT3HO75486 399 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 EIF6P56537 245 aaKnown RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PDCLQ13371 301 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RIPK1Q13546 671 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 MESDQ14696 234 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RABGAP1LQ5R372 815 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RAB42Q8N4Z0 105 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RXFP1Q9HBX9 757 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 TMEM253P0C7T8 217 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ACADVLP49748 655 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RPL26P61254 145 aaKnown RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ANO4Q32M45 955 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 BEND6Q5SZJ8 279 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 EAF2Q96CJ1 260 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 DGCR14Q96DF8 476 aaKnown RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ZNF518BQ9C0D4 1074 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 CAAP1Q9H8G2 361 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 USP6P35125 1406 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ANGPT2O15123 496 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 CYP21A2P08686 494 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 GARTP22102 1010 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PMLP29590 882 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 IRAK1P51617 712 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 KYNUQ16719 465 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 FBXO31Q5XUX0 539 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 C11orf57Q6ZUT1 292 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 HDDC2Q7Z4H3 204 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 MUC13Q9H3R2 512 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 DPP8Q6V1X1 898 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 FAM161BQ96MY7 647 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ZNF556Q9HAH1 456 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 KRT82Q9NSB4 513 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RABGEF1Q9UJ41 708 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PCDHB4Q9Y5E5 795 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RAD54BQ9Y620 910 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 CPDO75976 1380 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RHOBTB3O94955 611 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 SRGNP10124 158 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 DLG4P78352 724 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ROR2Q01974 943 aaKnown RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 RINLQ6ZS11 566 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 CLMNQ96JQ2 1002 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 USTQ9Y2C2 406 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 POLGP54098 1239 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 TOP3AQ13472 1001 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 USPL1Q5W0Q7 1092 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 DNAAF3Q8N9W5 541 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 KIAA1257Q9ULG3 409 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 SPRP35270 261 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 EME1Q96AY2 570 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 KIF17Q9P2E2 1029 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 NAB2Q15742 525 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PTGISQ16647 500 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 C17orf53Q8N3J3 647 aaPredicted RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 SCFD2Q8WU76 684 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 WDR91A4D1P6 747 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ACAT1P24752 427 aaKnown RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ZAP70P43403 619 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 TRIM67Q6ZTA4 783 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PLD3Q8IV08 490 aa5.2□□□□□ -1.58
HMCN1-201ENST00000271588 PAPOLBQ9NRJ5 636 aaKnown RBP5.2□□□□□ -1.58
HMCN1-201ENST00000271588 ARHGAP44Q17R89 818 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 LRRC31Q6UY01 552 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 MREGQ8N565 214 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 SEC16BQ96JE7 1060 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 POLR2EP19388 210 aaKnown RBP5.19□□□□□ -1.58
HMCN1-201ENST00000271588 CCT8P50990 548 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 CYB5D1Q6P9G0 228 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 GPR141Q7Z602 305 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 TRIM59Q8IWR1 403 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 MINDY2Q8NBR6 621 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 ATP6V1E2Q96A05 226 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 TMEM245Q9H330 911 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 HMG20AQ9NP66 347 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 DKK3Q9UBP4 350 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 KIAA1024Q9UPX6 916 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 FDFT1P37268 417 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 CYP2J2P51589 502 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 COPAP53621 1224 aa5.19□□□□□ -1.58
HMCN1-201ENST00000271588 PAPD7Q5XG87 772 aaKnown RBP5.19□□□□□ -1.58
HMCN1-201ENST00000271588 C11orf63Q6NUN7 778 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms