RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TMOD1P28289 359 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 CST5P28325 142 aaPredicted RBP16.64■□□□□ 0.25
COPS3-201ENST00000268717 GTF2F1P35269 517 aaKnown RBP eCLIP16.64■□□□□ 0.25
COPS3-201ENST00000268717 ATN1P54259 1190 aaPredicted RBP16.64■□□□□ 0.25
COPS3-201ENST00000268717 GJA9P57773 515 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 DLG4P78352 724 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 PSMD6Q15008 389 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 IQCEQ6IPM2 695 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 LRRC71Q8N4P6 559 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 RNF149Q8NC42 400 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 ZSWIM2Q8NEG5 633 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 TMEM117Q9H0C3 514 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 FZD8Q9H461 694 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 LUC7LQ9NQ29 371 aaKnown RBP16.64■□□□□ 0.25
COPS3-201ENST00000268717 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
COPS3-201ENST00000268717 GOLGA8IPA6NC78 632 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 MYADML2A6NDP7 307 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 RRN3P2A6NIE6 340 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 GOLGA8JA6NMD2 632 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 LRRIQ3A6PVS8 624 aaPredicted RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 KRT86O43790 486 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 AKR1B10O60218 316 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 GFPT2O94808 682 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 CCDC172P0C7W6 258 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 FERP16591 822 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 STAT1P42224 750 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 VAV2P52735 878 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 PTENP60484 403 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 APBA1Q02410 837 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 FAM187BQ17R55 369 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 CCSAPQ6IQ19 270 aaPredicted RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 IRF2BP2Q7Z5L9 587 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 ZNF592Q92610 1267 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 TSEN34Q9BSV6 310 aaKnown RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 SPC25Q9HBM1 224 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 LZTFL1Q9NQ48 299 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 ACKR2O00590 384 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 F2P00734 622 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 PRKCBP05771 671 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 PLEKP08567 350 aaPredicted RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 C6orf222P0C671 652 aaPredicted RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 PHKA2P46019 1235 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 GCLMP48507 274 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 GPC3P51654 580 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 GNG11P61952 73 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 NKX3-2P78367 333 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 IRX5P78411 483 aaPredicted RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 KLHL30Q0D2K2 578 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 SNX17Q15036 470 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 TDRD12Q587J7 1177 aaKnown RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 SMYD5Q6GMV2 418 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 SLC39A5Q6ZMH5 540 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 TLK2Q86UE8 772 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 RHPN2Q8IUC4 686 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 TRAPPC12Q8WVT3 735 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 FAM81BQ96LP2 452 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 ACO2Q99798 780 aaKnown RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 FAM213AQ9BRX8 229 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 MSTO1Q9BUK6 570 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 TARS2Q9BW92 718 aaKnown RBP16.63■□□□□ 0.25
COPS3-201ENST00000268717 L2HGDHQ9H9P8 463 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
COPS3-201ENST00000268717 TRIOBPQ9H2D6 2365 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 A0A1W2PQ45 241 aaPredicted RBP16.62■□□□□ 0.25
COPS3-201ENST00000268717 A0A1W2PQY0 241 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 MOXD2PA6NHM9 499 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 F8VZ95 297 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 CLDN3O15551 220 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 ZC3H11AO75152 810 aaKnown RBP eCLIP16.62■□□□□ 0.25
COPS3-201ENST00000268717 PROZP22891 400 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 KLRC1P26715 233 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 CPT1AP50416 773 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 CLCN3P51790 818 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 MCL1Q07820 350 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 KCNA10Q16322 511 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 SLC18A3Q16572 532 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 C10orf76Q5T2E6 689 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 TSHZ1Q6ZSZ6 1077 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
COPS3-201ENST00000268717 DNAJC12Q9UKB3 198 aa16.62■□□□□ 0.25
COPS3-201ENST00000268717 ZNF263O14978 683 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 PJA2O43164 708 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 EDN1P05305 212 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 SOX5P35711 763 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 ACLYP53396 1101 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 CDC42EP1Q00587 391 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 POU5F1Q01860 360 aaKnown RBP16.61■□□□□ 0.25
COPS3-201ENST00000268717 GRIK4Q16099 956 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 C1orf53Q5VUE5 145 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 CRELD2Q6UXH1 353 aaPredicted RBP16.61■□□□□ 0.25
COPS3-201ENST00000268717 C15orf39Q6ZRI6 1047 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 METTL13Q8N6R0 699 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 PCSK9Q8NBP7 692 aaKnown RBP16.61■□□□□ 0.25
COPS3-201ENST00000268717 FBXL13Q8NEE6 735 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms