RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PPM1KQ8N3J5 372 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 ZNF516Q92618 1163 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 ARHGAP39Q9C0H5 1083 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 IFT122Q9HBG6 1241 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
SCAF11-201ENST00000266589 PTPRJQ12913 1337 aa12.51□□□□□ -0.41
SCAF11-201ENST00000266589 A0A087WZ62 844 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 ABLIM1O14639 778 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 PJA2O43164 708 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 B4GALT5O43286 388 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 FAM189A1O60320 539 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 SLU7O95391 586 aaKnown RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 CCDC172P0C7W6 258 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 ANXA13P27216 316 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 TNFSF9P41273 254 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 PSMC4P43686 418 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 FCGRTP55899 365 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 POU5F1BQ06416 359 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 MCL1Q07820 350 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 ATF7IP2Q5U623 682 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 C15orf39Q6ZRI6 1047 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 KAT5Q92993 513 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 SECISBP2LQ93073 1101 aaKnown RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 VTI1AQ96AJ9 217 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 MAP7D2Q96T17 732 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 NAPGQ99747 312 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 CNTNAP2Q9UHC6 1331 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 FOXN3O00409 490 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 OGTO15294 1046 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 CTIFO43310 598 aaKnown RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 IQCF3P0C7M6 154 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 PROZP22891 400 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 CPT1AP50416 773 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 BRSK2Q8IWQ3 736 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 LMBR1Q8WVP7 490 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 NT5C1BQ96P26 610 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 AP5M1Q9H0R1 490 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 SETD4Q9NVD3 440 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 PRMT7Q9NVM4 692 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-201ENST00000266589 MRFAP1Q9Y605 127 aa12.5□□□□□ -0.41
SCAF11-201ENST00000266589 DYNC1I1O14576 645 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 ZEB2O60315 1214 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 AOC2O75106 756 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 CSDE1O75534 798 aaKnown RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 TBC1D8O95759 1140 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 MFAP3P55082 362 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 LACTBP83111 547 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 BIRC3Q13489 604 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 KIF22Q14807 665 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 ZACNQ401N2 412 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 TDRD10Q5VZ19 366 aaKnown RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 CDR2LQ86X02 465 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 HELQQ8TDG4 1101 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 PPP1R13LQ8WUF5 828 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 NLRP7Q8WX94 980 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 TSC1Q92574 1164 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 KAT2BQ92831 832 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 PI4K2AQ9BTU6 479 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 PTPRHQ9HD43 1115 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 Q9Y3F1 56 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 RRN3P2A6NIE6 340 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 TOMM70O94826 608 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 C4BPAP04003 597 aaKnown RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 AKR1A1P14550 325 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 PIK3CAP42336 1068 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 BEX3Q00994 111 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 NOGQ13253 232 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 MFSD10Q14728 455 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 FAM187BQ17R55 369 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 EEF1DP3Q658K8 133 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 KIAA0319LQ8IZA0 1049 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 LNX1Q8TBB1 728 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 SCLT1Q96NL6 688 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 PACSIN1Q9BY11 444 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 CPSF3Q9UKF6 684 aaKnown RBP12.49□□□□□ -0.41
SCAF11-201ENST00000266589 GABRQQ9UN88 632 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 TNFSF13BQ9Y275 285 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 CAPN6Q9Y6Q1 641 aa12.49□□□□□ -0.41
SCAF11-201ENST00000266589 NRCAMQ92823 1304 aa12.48□□□□□ -0.41
SCAF11-201ENST00000266589 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.412e-14■■■□□ 17.3
SCAF11-201ENST00000266589 ZC3H11AO75152 810 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCAF11-201ENST00000266589 MOCS3O95396 460 aa12.48□□□□□ -0.41
SCAF11-201ENST00000266589 HLA-DRAP01903 254 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms