RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 FIZ1Q96SL8 496 aa13.27□□□□□ -0.29
CHMP3-201ENST00000263856 USP15Q9Y4E8 981 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-201ENST00000263856 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-201ENST00000263856 DIAPH2O60879 1101 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 PSMD10O75832 226 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 SUN1O94901 812 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 RARGP13631 454 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 INTS8Q75QN2 995 aaKnown RBP13.26□□□□□ -0.29
CHMP3-201ENST00000263856 CPA5Q8WXQ8 436 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 USP21Q9UK80 565 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 CEP83Q9Y592 693 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 POC1B-GALNT4F8VUJ3 575 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 ASAP2O43150 1006 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 SNX3O60493 162 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 PAX7P23759 505 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 SOX10P56693 466 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
CHMP3-201ENST00000263856 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 XXYLT1Q8NBI6 393 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 TMEM117Q9H0C3 514 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 USP20Q9Y2K6 914 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 ANP32DO95626 131 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 GHRP10912 638 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 ATF2P15336 505 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 PLA2G4FQ68DD2 849 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 SP8Q8IXZ3 490 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 DAW1Q8N136 415 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 PLEKHO2Q8TD55 490 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 CENPTQ96BT3 561 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 SYT11Q9BT88 431 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 WNT8AQ9H1J5 351 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHMP3-201ENST00000263856 ANAPC5Q9UJX4 755 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
CHMP3-201ENST00000263856 MGRN1O60291 552 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 CYP3A4P08684 503 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 HSPA6P17066 643 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 CTNNA2P26232 953 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 PEX5P50542 639 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 C11orf63Q6NUN7 778 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 PIGWQ7Z7B1 504 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 KREMEN1Q96MU8 473 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 RUNDC3BQ96NL0 473 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 NKIRAS1Q9NYS0 192 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 PCYOX1Q9UHG3 505 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.25□□□□□ -0.29
CHMP3-201ENST00000263856 ATAD5Q96QE3 1844 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 ADRB2P07550 413 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 MYCLP12524 364 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-201ENST00000263856 NQO1P15559 274 aaKnown RBP13.25□□□□□ -0.29
CHMP3-201ENST00000263856 CHRNB2P17787 502 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 CIITAP33076 1130 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 ITIH4Q14624 930 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 HHIPL2Q6UWX4 724 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 ZNF365Q70YC5 407 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 HAUS6Q7Z4H7 955 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 SPATA21Q7Z572 469 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 CYP4X1Q8N118 509 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 SLC17A8Q8NDX2 589 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 LMO3Q8TAP4 145 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 SEMA4DQ92854 862 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 SLC5A5Q92911 643 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 HAUS1Q96CS2 278 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 FAM167BQ9BTA0 163 aa13.25□□□□□ -0.29
CHMP3-201ENST00000263856 A1CFQ9NQ94 594 aaKnown RBP13.25□□□□□ -0.29
CHMP3-201ENST00000263856 A0A1B0GUA9 196 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 KRT16P08779 473 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 NCALDP61601 193 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 FMO1Q01740 532 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 TRIM68Q6AZZ1 485 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 P3H4Q92791 437 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 ART4Q93070 314 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 MKL1Q969V6 931 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 RMDN2Q96LZ7 410 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 ACCSQ96QU6 501 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 SEL1LQ9UBV2 794 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 O00370 1275 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 PIAS1O75925 651 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 GJB6O95452 261 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 CYP11B1P15538 503 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 CD58P19256 250 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 ZNF449Q6P9G9 518 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 VSIG1Q86XK7 387 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 BICD1Q96G01 975 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 DMAC2Q9NW81 257 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 SLC12A4Q9UP95 1085 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 R3HDM2Q9Y2K5 976 aaKnown RBP13.24□□□□□ -0.29
CHMP3-201ENST00000263856 BTAF1O14981 1849 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 KIF13BQ9NQT8 1826 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 PEX19P40855 299 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 MFAP3P55082 362 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 WLSQ5T9L3 541 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 FMNL3Q8IVF7 1028 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 TAS1R2Q8TE23 839 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 PLVAPQ9BX97 442 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 KLHL14Q9P2G3 628 aa13.24□□□□□ -0.29
CHMP3-201ENST00000263856 AFF2P51816 1311 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms