RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RSPH10B2B2RC85 870 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 RSPH10BP0C881 870 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 ARHGAP4P98171 946 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 CBWD6Q4V339 395 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 PRR16Q569H4 304 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 CBWD3Q5JTY5 395 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 CBWD5Q5RIA9 395 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 TBC1D10AQ9BXI6 508 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 NINJ2Q9NZG7 142 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 PHTF1Q9UMS5 762 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 SMG5Q9UPR3 1016 aaKnown RBP13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 USP20Q9Y2K6 914 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 RASA4BC9J798 803 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 RASA4O43374 803 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 FOSP01100 380 aaPredicted RBP13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 CYP1A2P05177 515 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 ABHD2P08910 425 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 GNAT1P11488 350 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 SKIP12755 728 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 RAB27AP51159 221 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 GNPTABQ3T906 1256 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 C15orf52Q6ZUT6 534 aaKnown RBP13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 PALB2Q86YC2 1186 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 CNBD1Q8NA66 436 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 ZNF564Q8TBZ8 553 aaPredicted RBP13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 RUSC1Q9BVN2 902 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 PARVGQ9HBI0 331 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 UBE2TQ9NPD8 197 aaPredicted RBP13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 HAO1Q9UJM8 370 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 ASB3Q9Y575 518 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 TCRBV7S2A1N4TA0A589 114 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 EXOC3O60645 756 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 LRRN2O75325 713 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 MARK3P27448 753 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 PTPN4P29074 926 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 FOXN2P32314 431 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 CHKAP35790 457 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 VHLP40337 213 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 PTDSS1P48651 473 aaKnown RBP13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 ITGA8P53708 1063 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 BFSP1Q12934 665 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 RINT1Q6NUQ1 792 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 TMEM154Q6P9G4 183 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 USP17L6PQ6QN14 398 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 SLC9A9Q8IVB4 645 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 ANKLE1Q8NAG6 615 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 ATL2Q8NHH9 583 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 SLC20A1Q8WUM9 679 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 PAIP2Q9BPZ3 127 aaKnown RBP13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 SCOCQ9UIL1 159 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 CHKBQ9Y259 395 aa13.22□□□□□ -0.29
CHMP2B-201ENST00000263780 DDX60LQ5H9U9 1706 aaKnown RBP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 HGSO14964 777 aaPredicted RBP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 NVLO15381 856 aaKnown RBP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 PRPF4O43172 522 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 TARSP26639 723 aaKnown RBP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 ADCY8P40145 1251 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 CYP2J2P51589 502 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 KCNA1Q09470 495 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 CCDC6Q16204 474 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 DPP8Q6V1X1 898 aaPredicted RBP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 TPTE2Q6XPS3 522 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 FAM47EQ6ZV65 393 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 NBPF5PQ86XG9 351 aaPredicted RBP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 ZNF398Q8TD17 642 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 LRRC8CQ8TDW0 803 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 TRAPPC9Q96Q05 1148 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 NUP85Q9BW27 656 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 KIAA1683Q9H0B3 1180 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 TLE6Q9H808 572 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 PPCSQ9HAB8 311 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 AGPAT3Q9NRZ7 376 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 LNPEPQ9UIQ6 1025 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 LRCH1Q9Y2L9 728 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
CHMP2B-201ENST00000263780 MROH7Q68CQ1 1323 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 NHSQ6T4R5 1651 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 ECE2O60344 883 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 RTN3O95197 1032 aaPredicted RBP13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 ASMTLO95671 621 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 CENPCQ03188 943 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 MOGSQ13724 837 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 GRIK5Q16478 980 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 SLC45A4Q5BKX6 768 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms