RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 MYO10Q9HD67 2058 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 TRIM13O60858 407 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 NDUFA10O95299 355 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 FLT3P36888 993 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 CLMNQ96JQ2 1002 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 GOLPH3LQ9H4A5 285 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 ZNF302Q9NR11 478 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 LCMT1Q9UIC8 334 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 DIS3Q9Y2L1 958 aaKnown RBP11.99□□□□□ -0.49
PTPN4-201ENST00000263708 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
PTPN4-201ENST00000263708 ERBB3P21860 1342 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 CAV1Q03135 178 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 KDSRQ06136 332 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
PTPN4-201ENST00000263708 PPP6R2O75170 966 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 ATP12AP54707 1039 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 CCDC149Q6ZUS6 474 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 ATP11CQ8NB49 1132 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 VPS50Q96JG6 964 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 SPATA33Q96N06 139 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 PNMA6FA0A0J9YX94 578 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 FEN1P39748 380 aaKnown RBP11.99□□□□□ -0.49
PTPN4-201ENST00000263708 SERPINB4P48594 390 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 STAG2Q8N3U4 1231 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 RMDN3Q96TC7 470 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 RGS5O15539 181 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 PEX1O43933 1283 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 MZF1P28698 734 aaPredicted RBP11.99□□□□□ -0.49
PTPN4-201ENST00000263708 DPYDQ12882 1025 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 RALGDSQ12967 914 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 IP6K2Q9UHH9 426 aa11.99□□□□□ -0.49
PTPN4-201ENST00000263708 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 YWHAZP63104 245 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 EIF2B5Q13144 721 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 INAQ16352 499 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 IL31Q6EBC2 164 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 SIX5Q8N196 739 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 AGAP3Q96P47 875 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 ARHGEF10O15013 1369 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 HMGB3O15347 200 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 KCNN4O15554 427 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 HSD17B4P51659 736 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 HIC1Q14526 733 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 GALNT8Q9NY28 637 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 TADA2AO75478 443 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 GCLMP48507 274 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 TTLL4Q14679 1199 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 ZNF614Q8N883 585 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 FAM167AQ96KS9 214 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 DNAJC12Q9UKB3 198 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 E2F8A0AVK6 867 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 CUL4AQ13619 759 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 NLGN1Q8N2Q7 840 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 ERVV-2B6SEH9 535 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 DLGAP3O95886 979 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 PSMC6P62333 389 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 CDK17Q00537 523 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 DPCR1Q3MIW9 517 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 C11orf88Q6PI97 169 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 CCDC60Q8IWA6 550 aaPredicted RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 ZNF564Q8TBZ8 553 aaPredicted RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 A8MXQ7 604 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 GLYCTKQ8IVS8 523 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 CDKL3Q8IVW4 592 aaPredicted RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 BFARQ9NZS9 450 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 PPIEQ9UNP9 301 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 SH3BP1Q9Y3L3 701 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 A0A087WWV3 80 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 C16orf96A6NNT2 1141 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 GPC5P78333 572 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 CASP8Q14790 479 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 DUOX2Q9NRD8 1548 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 ATP1A1P05023 1023 aaKnown RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 BRAFP15056 766 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 CHI3L1P36222 383 aaPredicted RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 PLOD1Q02809 727 aaPredicted RBP11.98□□□□□ -0.49
PTPN4-201ENST00000263708 TNIP2Q8NFZ5 429 aa11.98□□□□□ -0.49
PTPN4-201ENST00000263708 ATPAF2Q8N5M1 289 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 PARD6BQ9BYG5 372 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 BHMT2Q9H2M3 363 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 NDST4Q9H3R1 872 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 BCAR1P56945 870 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 SNF8Q96H20 258 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 ZFATQ9P243 1243 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 CHUKO15111 745 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 USP17L8P0C7I0 530 aa11.97□□□□□ -0.49
PTPN4-201ENST00000263708 TCN1P20061 433 aaPredicted RBP11.97□□□□□ -0.49
PTPN4-201ENST00000263708 TBXAS1P24557 533 aaPredicted RBP11.97□□□□□ -0.49
PTPN4-201ENST00000263708 SERPINB1P30740 379 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms