RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 POMGNT1Q8WZA1 660 aa13.55□□□□□ -0.24
LIG1-201ENST00000263274 SGSM3Q96HU1 749 aa13.55□□□□□ -0.24
LIG1-201ENST00000263274 C9orf72Q96LT7 481 aa13.55□□□□□ -0.24
LIG1-201ENST00000263274 GLIS2Q9BZE0 524 aaPredicted RBP13.55□□□□□ -0.24
LIG1-201ENST00000263274 KCNH7Q9NS40 1196 aa13.55□□□□□ -0.24
LIG1-201ENST00000263274 HOMER3Q9NSC5 361 aa13.55□□□□□ -0.24
LIG1-201ENST00000263274 ZHX2Q9Y6X8 837 aa13.55□□□□□ -0.24
LIG1-201ENST00000263274 MAST2Q6P0Q8 1798 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 FMNL3Q8IVF7 1028 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 PLVAPQ9BX97 442 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 TMEM117Q9H0C3 514 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 STMN4Q9H169 189 aaPredicted RBP13.54□□□□□ -0.24
LIG1-201ENST00000263274 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 STX2P32856 288 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 MFAP3P55082 362 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 ARMC9Q7Z3E5 817 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 SRRM1Q8IYB3 904 aaKnown RBP13.54□□□□□ -0.24
LIG1-201ENST00000263274 DAW1Q8N136 415 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
LIG1-201ENST00000263274 CDC42EP4Q9H3Q1 356 aaKnown RBP13.54□□□□□ -0.24
LIG1-201ENST00000263274 TMEM206Q9H813 350 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 ABCF3Q9NUQ8 709 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 KLHL11Q9NVR0 708 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 FRMPD4Q14CM0 1322 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 TMEM120BA0PK00 339 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 RIPK2O43353 540 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 ZBTB48P10074 688 aaPredicted RBP13.54□□□□□ -0.24
LIG1-201ENST00000263274 ELF1P32519 619 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 SLMAPQ14BN4 828 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 IL31RAQ8NI17 732 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 EPS8L1Q8TE68 723 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 SLC5A5Q92911 643 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 NT5C1BQ96P26 610 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 MYH11P35749 1972 aa13.54□□□□□ -0.24
LIG1-201ENST00000263274 NFIBO00712 420 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 SLC26A4O43511 780 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 KCNA4P22459 653 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 PAX7P23759 505 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 BAG6P46379 1132 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 KIF22Q14807 665 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 GMCL1P1Q8NEA9 526 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 FIZ1Q96SL8 496 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 WNT8AQ9H1J5 351 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 CHST7Q9NS84 486 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 P4HBP07237 508 aaKnown RBP13.53□□□□□ -0.24
LIG1-201ENST00000263274 CYP3A4P08684 503 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 TNNI1P19237 187 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 PPP2R5CQ13362 524 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 NAA25Q14CX7 972 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 EMC10Q5UCC4 262 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 STRIP1Q5VSL9 837 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 TLCD1Q96CP7 247 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 MASTLQ96GX5 879 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 PDGFDQ9GZP0 370 aaPredicted RBP13.53□□□□□ -0.24
LIG1-201ENST00000263274 ANAPC5Q9UJX4 755 aa13.53□□□□□ -0.24
LIG1-201ENST00000263274 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 RASSF9O75901 435 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 AGTP01019 485 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 ADRB2P07550 413 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 BRAFP15056 766 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 HSPA6P17066 643 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 ITGB5P18084 799 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 PTGIRP43119 386 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 TRAF1Q13077 416 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 MTM1Q13496 603 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 AUHQ13825 339 aaKnown RBP13.52□□□□□ -0.24
LIG1-201ENST00000263274 SNRNP35Q16560 246 aaKnown RBP13.52□□□□□ -0.24
LIG1-201ENST00000263274 DACT2Q5SW24 774 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 NAIF1Q69YI7 327 aaPredicted RBP13.52□□□□□ -0.24
LIG1-201ENST00000263274 TRPM8Q7Z2W7 1104 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 NLGN1Q8N2Q7 840 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 KIFAP3Q92845 792 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 SEMA4DQ92854 862 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 KREMEN1Q96MU8 473 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 RAVER2Q9HCJ3 691 aaKnown RBP13.52□□□□□ -0.24
LIG1-201ENST00000263274 DMAC2Q9NW81 257 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 TTC7AQ9ULT0 858 aaPredicted RBP13.52□□□□□ -0.24
LIG1-201ENST00000263274 L3MBTL1Q9Y468 752 aa13.52□□□□□ -0.24
LIG1-201ENST00000263274 DENND3A2RUS2 1198 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 EIF4E1BA6NMX2 242 aaKnown RBP13.52□□□□□ -0.25
LIG1-201ENST00000263274 H0YIN7 160 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 ATF2P15336 505 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 CHKAP35790 457 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 DRP2Q13474 957 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 DGKZQ13574 1117 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 MXRA8Q9BRK3 442 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.25
LIG1-201ENST00000263274 UBOX5O94941 541 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 CYP11B1P15538 503 aa13.52□□□□□ -0.25
LIG1-201ENST00000263274 YWHABP31946 246 aaKnown RBP13.52□□□□□ -0.25
LIG1-201ENST00000263274 QARSP47897 775 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 657.3 ms