RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 PARD3BQ8TEW8 1205 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 TBX20Q9UMR3 447 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 TELO2Q9Y4R8 837 aa17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 ZNFX1Q9P2E3 1918 aaKnown RBP17.56■□□□□ 0.4
TM9SF1-201ENST00000261789 PODXLO00592 558 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 PLA2G6O60733 806 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 MAPTP10636 758 aaKnown RBP17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 GZMAP12544 262 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 NPTX2P47972 431 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 MFAP3P55082 362 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 BSNDQ8WZ55 320 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 CHMP6Q96FZ7 201 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 DDX23Q9BUQ8 820 aaKnown RBP17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 DNAJC17Q9NVM6 304 aaKnown RBP17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 DENND3A2RUS2 1198 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 C5orf60A6NFR6 353 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 FOXO6A8MYZ6 492 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 RIPK2O43353 540 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 SORBS3O60504 671 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 KRT5P13647 590 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 IFNAR2P48551 515 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 NCKAP1LP55160 1127 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 ALCAMQ13740 583 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 TRIP13Q15645 432 aaPredicted RBP17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 NBPF9Q3BBW0 867 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 SPDYCQ5MJ68 293 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 GKAP1Q5VSY0 366 aaPredicted RBP17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 PCNX4Q63HM2 1172 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 KRT39Q6A163 491 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 RNF207Q6ZRF8 634 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 TMEM161BQ8NDZ6 487 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 ATG4AQ8WYN0 398 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 GGA2Q9UJY4 613 aa17.55■□□□□ 0.4
TM9SF1-201ENST00000261789 LOXHD1Q8IVV2 1947 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 GRIN3BO60391 1043 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 CYP1A2P05177 515 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 TCEAL1Q15170 157 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 LMBRD2Q68DH5 695 aaPredicted RBP17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 SLC39A4Q6P5W5 647 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 ANO5Q75V66 913 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 DDX1Q92499 740 aaKnown RBP17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 PGM2Q96G03 612 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 CCDC114Q96M63 670 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 GMLQ99445 158 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 PRMT1Q99873 361 aaKnown RBP17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 JPH2Q9BR39 696 aaPredicted RBP17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 FAM129AQ9BZQ8 928 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 MTRF1LQ9UGC7 380 aaKnown RBP17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 HSPA6P17066 643 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 MMP13P45452 471 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 PDE6CP51160 858 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 CDR2Q01850 454 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 PGM5Q15124 567 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 PPP1R7Q15435 360 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 OTUD6AQ7L8S5 288 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 ATXN2LQ8WWM7 1075 aaKnown RBP17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 HERPUD2Q9BSE4 406 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 RAB20Q9NX57 234 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
TM9SF1-201ENST00000261789 TP73O15350 636 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 MTA2O94776 668 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 ACSL3O95573 720 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 SSTR3P32745 418 aaPredicted RBP17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 RWDD2BP57060 319 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 SP4Q02446 784 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 CLUL1Q15846 466 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 LONRF1Q17RB8 773 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 ANKRD20A8PQ5CZ79 823 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 SV2AQ7L0J3 742 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 TEX2Q8IWB9 1127 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 LARGE2Q8N3Y3 721 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 ART4Q93070 314 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 ZNF317Q96PQ6 595 aaPredicted RBP17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 FAM118BQ9BPY3 351 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 DEFB129Q9H1M3 183 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 CHST7Q9NS84 486 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 GTF3C4Q9UKN8 822 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 CYP1B1Q16678 543 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 C4orf19Q8IY42 314 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 FBXL13Q8NEE6 735 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 PSPC1Q8WXF1 523 aaKnown RBP17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 CPA5Q8WXQ8 436 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 POMGNT1Q8WZA1 660 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 PWWP2AQ96N64 755 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 CD248Q9HCU0 757 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 SLC40A1Q9NP59 571 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 ANAPC7Q9UJX3 599 aa17.53■□□□□ 0.4
TM9SF1-201ENST00000261789 PCNTO95613 3336 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 ASNSP08243 561 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 CREB1P16220 341 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 PSMC5P62195 406 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 LRRC34Q8IZ02 419 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 C3orf20Q8ND61 904 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 TMEM174Q8WUU8 243 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 WNK4Q96J92 1243 aa17.52■□□□□ 0.4
TM9SF1-201ENST00000261789 NT5C1BQ96P26 610 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms