RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 SEPT9Q9UHD8 586 aaPredicted RBP7.56□□□□□ -1.2
HERC2-201ENST00000261609 ABCA5Q8WWZ7 1642 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 WLSQ5T9L3 541 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 WDR93Q6P2C0 686 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 TTC8Q8TAM2 541 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 ARHGEF1Q92888 912 aaKnown RBP7.56□□□□□ -1.2
HERC2-201ENST00000261609 TUBA8Q9NY65 449 aaPredicted RBP7.56□□□□□ -1.2
HERC2-201ENST00000261609 SLC12A6Q9UHW9 1150 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 LOC100653049A0A140TA62 436 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 KRT34O76011 436 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 A1BGP04217 495 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 PSMC3P17980 439 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 TBCCQ15814 346 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 SLFN13Q68D06 897 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 UBE4BO95155 1302 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 PNMA6FA0A0J9YX94 578 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 WDR64B1ANS9 1081 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 PRR23D1E9PI22 279 aaPredicted RBP7.56□□□□□ -1.2
HERC2-201ENST00000261609 PRR23D2P0DMB1 279 aaPredicted RBP7.56□□□□□ -1.2
HERC2-201ENST00000261609 CPA2P48052 419 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 TRIM39Q9HCM9 518 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 C6orf203Q9P0P8 240 aaPredicted RBP7.56□□□□□ -1.2
HERC2-201ENST00000261609 MARCOQ9UEW3 520 aaPredicted RBP7.56□□□□□ -1.2
HERC2-201ENST00000261609 IP6K2Q9UHH9 426 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 LRCH1Q9Y2L9 728 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 ADGRL2O95490 1459 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 NAB2Q15742 525 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 ARL13BQ3SXY8 428 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 TC2NQ8N9U0 490 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 TRIM63Q969Q1 353 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 ITIH6Q6UXX5 1313 aa7.56□□□□□ -1.2
HERC2-201ENST00000261609 MAGI2Q86UL8 1455 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 XPOTO43592 962 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 REXO4Q9GZR2 422 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 GJB4Q9NTQ9 266 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 HNRNPRO43390 633 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 NT5C2P49902 561 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 KRT76Q01546 638 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 CACNB1Q02641 598 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 B3GNT6Q6ZMB0 384 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 SLC35G2Q8TBE7 412 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 GDPD5Q8WTR4 605 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 DRAP1Q14919 205 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 STKLD1Q8NE28 680 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 MCRS1Q96EZ8 462 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 URB1O60287 2271 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 SORBS3O60504 671 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 RPS6KA5O75582 802 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 SLC34A1Q06495 639 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 TLK2Q86UE8 772 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 RFFLQ8WZ73 363 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 ZFRQ96KR1 1074 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 MTRQ99707 1265 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 PDE8BO95263 885 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 FMR1Q06787 632 aaKnown RBP eCLIP7.55□□□□□ -1.21e-6■■■■□ 20.2
HERC2-201ENST00000261609 ATP1A4Q13733 1029 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 CAPRIN1Q14444 709 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 ZBED8Q8IZ13 594 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 PIGSQ96S52 555 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 GTSE1Q9NYZ3 720 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 ATP8B3O60423 1300 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 TRIM49BA6NDI0 452 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 KCNH2Q12809 1159 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 TSTA3Q13630 321 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 CABLES1Q8TDN4 633 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 SLC7A3Q8WY07 619 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 FAM129AQ9BZQ8 928 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 PCIF1Q9H4Z3 704 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 FOXN1O15353 648 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 TRIM49P0CI25 452 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 TRIM49CP0CI26 452 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 HSPA1AP0DMV8 641 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 HSPA1BP0DMV9 641 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 ZNF18P17022 549 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 TCN1P20061 433 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 MTTPP55157 894 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 SNX30Q5VWJ9 437 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 LRRN4CLQ8ND94 238 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 EIF4G3O43432 1585 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 SPDYE2BA6NHP3 402 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 CDH16O75309 829 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 SPDYE6P0CI01 402 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 ERICH1Q86X53 443 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 ALDH8A1Q9H2A2 487 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 TYW5A2RUC4 315 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 TMEM247A6NEH6 219 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 SHC4Q6S5L8 630 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 IZUMO2Q6UXV1 221 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 BCL10O95999 233 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 ENO3P13929 434 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 TAGAPQ8N103 731 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 USP33Q8TEY7 942 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 CCDC17Q96LX7 622 aa7.55□□□□□ -1.2
HERC2-201ENST00000261609 DMAP1Q9NPF5 467 aaPredicted RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 LIMA1Q9UHB6 759 aaKnown RBP7.55□□□□□ -1.2
HERC2-201ENST00000261609 TFAMQ00059 246 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms