RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TRIM33Q9UPN9 1127 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
COL8A1-201ENST00000261037 KRT7P08729 469 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 PYGBP11216 843 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 NAA30Q147X3 362 aaPredicted RBP12.81□□□□□ -0.36
COL8A1-201ENST00000261037 THEMIS2Q5TEJ8 643 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 LZICQ8WZA0 190 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 CLMNQ96JQ2 1002 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 MAGEB5Q9BZ81 275 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 PLEKHA5Q9HAU0 1116 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 SPATS2LQ9NUQ6 558 aaKnown RBP12.81□□□□□ -0.36
COL8A1-201ENST00000261037 FBXL5Q9UKA1 691 aa12.81□□□□□ -0.36
COL8A1-201ENST00000261037 KCNN4O15554 427 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 ARFIP2P53365 341 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 INO80Q9ULG1 1556 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 SETD1BQ9UPS6 1966 aaKnown RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 ACOT2P49753 483 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 ZNF235Q14590 738 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 ITPRIPL1Q6GPH6 555 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 DDX53Q86TM3 631 aaKnown RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 PGBD4Q96DM1 585 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 NR1H4Q96RI1 486 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 JPH1Q9HDC5 661 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 TMCC1O94876 653 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 CHRNA3P32297 505 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 PTK2BQ14289 1009 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 ACBD5Q5T8D3 534 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 LRRC8EQ6NSJ5 796 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 PID1Q7Z2X4 250 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 AGAP3Q96P47 875 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 LCMT1Q9UIC8 334 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 GRID2IPA4D2P6 1211 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 TXNP10599 105 aaKnown RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 KCNA2P16389 499 aa12.8□□□□□ -0.36
COL8A1-201ENST00000261037 SPATA2LQ8IUW3 424 aaPredicted RBP12.8□□□□□ -0.36
COL8A1-201ENST00000261037 ALDH18A1P54886 795 aaKnown RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 CUL3Q13618 768 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 NLRP14Q86W24 1093 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 DPF2Q92785 391 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 CHGBP05060 677 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 SESN2P58004 480 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 ATP2C1P98194 919 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 FAM118BQ9BPY3 351 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 TAF1DQ9H5J8 278 aaPredicted RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 DONSONQ9NYP3 566 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 HSPBP1Q9NZL4 362 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 NOP53Q9NZM5 478 aaKnown RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 AMACRQ9UHK6 382 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 ADGRG1Q9Y653 693 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 NFIXQ14938 502 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 CATSPER3Q86XQ3 398 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 PRMT1Q99873 361 aaKnown RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 PCDHA10Q9Y5I2 948 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 LMNAP02545 664 aaKnown RBP12.79□□□□□ -0.36
COL8A1-201ENST00000261037 RALAP11233 206 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 TPI1P60174 286 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 FAM167BQ9BTA0 163 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 TYK2P29597 1187 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 IFNA8P32881 189 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 FLOT2Q14254 428 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 OTULINQ96BN8 352 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 UNC45AQ9H3U1 944 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 AGAP1Q9UPQ3 857 aa12.79□□□□□ -0.36
COL8A1-201ENST00000261037 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 MYBP10242 640 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 MICALL2Q8IY33 904 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 TAGAPQ8N103 731 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 TEKT4Q8WW24 435 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 FBXO2Q9UK22 296 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 MED14O60244 1454 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 ZSCAN9O15535 394 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 SERPIND1P05546 499 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 ZC3H12BQ5HYM0 836 aaKnown RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 TRIM51Q9BSJ1 452 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 NEUROG2Q9H2A3 272 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 ADAM21Q9UKJ8 722 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 ASAP2O43150 1006 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 UPP2O95045 317 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 EYA4O95677 639 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 HLA-DPA1P20036 260 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 STAT5BP51692 787 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 DAB2P98082 770 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 ACTN3Q08043 901 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 NR1H3Q13133 447 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms