RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TRAF3IP3Q9Y228 551 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 RANBP2P49792 3224 aaKnown RBP22.57■■□□□ 1.2
RTCA-201ENST00000260563 TGFB1I1O43294 461 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 CALUO43852 315 aaPredicted RBP22.57■■□□□ 1.2
RTCA-201ENST00000260563 UPP2O95045 317 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 EOMESO95936 686 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 ATF7P17544 494 aaPredicted RBP22.57■■□□□ 1.2
RTCA-201ENST00000260563 SNRPFP62306 86 aaKnown RBP22.57■■□□□ 1.2
RTCA-201ENST00000260563 FAM189BP81408 668 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 ARMCX5Q6P1M9 558 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 CSGALNACT2Q8N6G5 542 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 SMG8Q8ND04 991 aaKnown RBP22.57■■□□□ 1.2
RTCA-201ENST00000260563 PHOSPHO2Q8TCD6 241 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 TOP1MTQ969P6 601 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 HAPLN2Q9GZV7 340 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 PRO3102Q9H379 93 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 CGNQ9P2M7 1197 aaKnown RBP22.57■■□□□ 1.2
RTCA-201ENST00000260563 STYXL1Q9Y6J8 313 aa22.57■■□□□ 1.2
RTCA-201ENST00000260563 ATP2A2P16615 1042 aaKnown RBP22.56■■□□□ 1.2
RTCA-201ENST00000260563 EDRF1Q3B7T1 1238 aa22.56■■□□□ 1.2
RTCA-201ENST00000260563 ZNF598Q86UK7 904 aaKnown RBP22.56■■□□□ 1.2
RTCA-201ENST00000260563 GOLGA5Q8TBA6 731 aa22.56■■□□□ 1.2
RTCA-201ENST00000260563 APOL6Q9BWW8 343 aa22.56■■□□□ 1.2
RTCA-201ENST00000260563 AGPAT3Q9NRZ7 376 aa22.56■■□□□ 1.2
RTCA-201ENST00000260563 SAMSN1Q9NSI8 373 aaKnown RBP22.56■■□□□ 1.2
RTCA-201ENST00000260563 HES2Q9Y543 173 aa22.56■■□□□ 1.2
RTCA-201ENST00000260563 A0A0B4J269 797 aa22.55■■□□□ 1.2
RTCA-201ENST00000260563 ITGA4P13612 1032 aa22.55■■□□□ 1.2
RTCA-201ENST00000260563 GARTP22102 1010 aa22.55■■□□□ 1.2
RTCA-201ENST00000260563 ADSSP30520 456 aa22.55■■□□□ 1.2
RTCA-201ENST00000260563 TMCO2Q7Z6W1 182 aaPredicted RBP22.55■■□□□ 1.2
RTCA-201ENST00000260563 MRPL10Q7Z7H8 261 aaKnown RBP22.55■■□□□ 1.2
RTCA-201ENST00000260563 THNSL1Q8IYQ7 743 aa22.55■■□□□ 1.2
RTCA-201ENST00000260563 NOC3LQ8WTT2 800 aaKnown RBP22.55■■□□□ 1.2
RTCA-201ENST00000260563 LPPQ93052 612 aa22.55■■□□□ 1.2
RTCA-201ENST00000260563 SRRTQ9BXP5 876 aaKnown RBP22.55■■□□□ 1.2
RTCA-201ENST00000260563 COL4A6Q14031 1691 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 KIAA1671Q9BY89 1806 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 HOXA2O43364 376 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 ZNF18P17022 549 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 GRM5P41594 1212 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 FKBP3Q00688 224 aaKnown RBP22.54■■□□□ 1.2
RTCA-201ENST00000260563 FAM117BQ6P1L5 589 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 CEP120Q8N960 986 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 CBWD1Q9BRT8 395 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 CCDC94Q9BW85 323 aaPredicted RBP22.54■■□□□ 1.2
RTCA-201ENST00000260563 THAP9Q9H5L6 903 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 SNTG2Q9NY99 539 aa22.54■■□□□ 1.2
RTCA-201ENST00000260563 AGO2Q9UKV8 859 aaKnown RBP22.54■■□□□ 1.2
RTCA-201ENST00000260563 CLIC2O15247 247 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 OGTO15294 1046 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 FGFR1OPO95684 399 aaKnown RBP22.53■■□□□ 1.2
RTCA-201ENST00000260563 OSTNP61366 133 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 NFIL3Q16649 462 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 KYAT1Q16773 422 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 HSP90AA4PQ58FG1 418 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 CDKAL1Q5VV42 579 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 HERC6Q8IVU3 1022 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 CRIPAKQ8N1N5 446 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 RSAD1Q9HA92 442 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 UBN1Q9NPG3 1134 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 PARP2Q9UGN5 583 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 NLRC5Q86WI3 1866 aa22.53■■□□□ 1.2
RTCA-201ENST00000260563 MEIS3P2A8K0S8 358 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 KIAA0391O15091 583 aaKnown RBP22.52■■□□□ 1.2
RTCA-201ENST00000260563 GJB5O95377 273 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 AGMOQ6ZNB7 445 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 LRRC55Q6ZSA7 311 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 ZC3H3Q8IXZ2 948 aaKnown RBP22.52■■□□□ 1.2
RTCA-201ENST00000260563 ABI1Q8IZP0 508 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 ZBED2Q9BTP6 218 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 PCIF1Q9H4Z3 704 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 HSPBP1Q9NZL4 362 aa22.52■■□□□ 1.2
RTCA-201ENST00000260563 A0A1W2PPC1 479 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 FAM189A1O60320 539 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 RECQL4O94761 1208 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 LDHAP00338 332 aaKnown RBP22.52■■□□□ 1.19
RTCA-201ENST00000260563 NR3C1P04150 777 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 FGFR1P11362 822 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 ATP1A3P13637 1013 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 CDK11BP21127 795 aaKnown RBP22.52■■□□□ 1.19
RTCA-201ENST00000260563 NR2F2P24468 414 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 AKAP5P24588 427 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 RPL13P26373 211 aaKnown RBP22.52■■□□□ 1.19
RTCA-201ENST00000260563 YARSP54577 528 aaKnown RBP22.52■■□□□ 1.19
RTCA-201ENST00000260563 ADAM9Q13443 819 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 SEZ6Q53EL9 994 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 C12orf56Q8IXR9 622 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 SAAL1Q96ER3 474 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 EEF2KMTQ96G04 330 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 CEP63Q96MT8 703 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 ACAP3Q96P50 834 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 RNF39Q9H2S5 420 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 GIT1Q9Y2X7 761 aa22.52■■□□□ 1.19
RTCA-201ENST00000260563 CETN3O15182 167 aa22.51■■□□□ 1.19
RTCA-201ENST00000260563 DGKIO75912 1065 aa22.51■■□□□ 1.19
RTCA-201ENST00000260563 CYP2J2P51589 502 aa22.51■■□□□ 1.19
RTCA-201ENST00000260563 PLCB2Q00722 1185 aa22.51■■□□□ 1.19
RTCA-201ENST00000260563 GLB1LQ6UWU2 654 aa22.51■■□□□ 1.19
RTCA-201ENST00000260563 FAM114A1Q8IWE2 563 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms