RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 ZNF746Q6NUN9 644 aaPredicted RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 RASGEF1CQ8N431 466 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 IL31RAQ8NI17 732 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 STAMBPL1Q96FJ0 436 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 AGBL1Q96MI9 1066 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 NACC1Q96RE7 527 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 PIDD1Q9HB75 910 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ERVK-5Q9HDB9 667 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 DMAC2Q9NW81 257 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 AMFRQ9UKV5 643 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 A0A0A6YYK5 440 aaPredicted RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 H0YGN5 161 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 RAD17O75943 681 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 FSBPO95073 299 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 CLTAP09496 248 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 MXRA7P84157 204 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 BFSP1Q12934 665 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ITGB3BPQ13352 177 aaPredicted RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 FXNQ16595 210 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 SLC43A3Q8NBI5 491 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 RMDN2Q96LZ7 410 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 WDR11Q9BZH6 1224 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 TMEM39BQ9GZU3 492 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 LNPEPQ9UIQ6 1025 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 DCDC2CA8MYV0 355 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 MEFVO15553 781 aaPredicted RBP12.11□□□□□ -0.47
PDE6B-201ENST00000255622 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 SMNDC1O75940 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDE6B-201ENST00000255622 APBA3O96018 575 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 ZNF844Q08AG5 666 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 DGKZQ13574 1117 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 CUL1Q13616 776 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 CD302Q8IX05 232 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 RFFLQ8WZ73 363 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 KAT5Q92993 513 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 TAOK3Q9H2K8 898 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 SUPT3HO75486 399 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 PPP3CAQ08209 521 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 CYB5D1Q6P9G0 228 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 LMO3Q8TAP4 145 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 ALG3Q92685 438 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 GLG1Q92896 1179 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 TMBIM4Q9HC24 238 aa12.11□□□□□ -0.47
PDE6B-201ENST00000255622 UBE2TQ9NPD8 197 aaPredicted RBP12.11□□□□□ -0.47
PDE6B-201ENST00000255622 NCANO14594 1321 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 TMEM110-MUSTN1A8MSY1 372 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
PDE6B-201ENST00000255622 TMEM253P0C7T8 217 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 STIP1P31948 543 aaKnown RBP12.1□□□□□ -0.47
PDE6B-201ENST00000255622 GCLMP48507 274 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 MARCKSL1P49006 195 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 PPATQ06203 517 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 INTUQ9ULD6 942 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
PDE6B-201ENST00000255622 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 NFIBO00712 420 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 TIMM44O43615 452 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 TNFAIP3P21580 790 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 ANXA13P27216 316 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 B4GALNT4Q76KP1 1039 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 FAM228AQ86W67 206 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 MKNK1Q9BUB5 465 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 MRGBPQ9NV56 204 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
PDE6B-201ENST00000255622 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.1□□□□□ -0.47
PDE6B-201ENST00000255622 BHMG1C9JSJ3 638 aaPredicted RBP12.1□□□□□ -0.47
PDE6B-201ENST00000255622 BACH1O14867 736 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 PPP1R37O75864 691 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 LINGO3P0C6S8 592 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 MYZAPP0CAP1 466 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 NFIL3Q16649 462 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 TMC3Q7Z5M5 1100 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 TRIM50Q86XT4 487 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 CPNE8Q86YQ8 564 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 PLEKHO2Q8TD55 490 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 GPRC5CQ9NQ84 441 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 KCNH7Q9NS40 1196 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
PDE6B-201ENST00000255622 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 CCDC188H7C350 402 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 TMOD1P28289 359 aa12.09□□□□□ -0.47
PDE6B-201ENST00000255622 TUFMP49411 452 aaKnown RBP12.09□□□□□ -0.47
PDE6B-201ENST00000255622 NPEPPSP55786 919 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms