RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ZFP42Q96MM3 310 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 MTMR9Q96QG7 549 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 RPS6KC1Q96S38 1066 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 SLC24A3Q9HC58 644 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 MIOSQ9NXC5 875 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 FAN1Q9Y2M0 1017 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 HES2Q9Y543 173 aa11.47□□□□□ -0.57
VPS50-201ENST00000251739 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 F8W810 466 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 JAK2O60674 1132 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 N4BP1O75113 896 aaKnown RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 BAG4O95429 457 aaKnown RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 C1RP00736 705 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 ALDH2P05091 517 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 SPATA31C1P0DKV0 1188 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 ITGA4P13612 1032 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 GLRA2P23416 452 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 MLH1P40692 756 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 SCNN1GP51170 649 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 TFDP1Q14186 410 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 CALCRLQ16602 461 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 TAS1R1Q7RTX1 841 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 TPH2Q8IWU9 490 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 DIS3L2Q8IYB7 885 aaKnown RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 GPR65Q8IYL9 337 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 TMEM105Q8N8V8 129 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 CPB2Q96IY4 423 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 GAD1Q99259 594 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 EMILIN2Q9BXX0 1053 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 NXF3Q9H4D5 531 aaKnown RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 TTC12Q9H892 705 aaPredicted RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 BRMS1Q9HCU9 246 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 MRPL17Q9NRX2 175 aaKnown RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 CHST7Q9NS84 486 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 DBR1Q9UK59 544 aaKnown RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 PCDHA12Q9UN75 941 aa11.46□□□□□ -0.57
VPS50-201ENST00000251739 PRG3Q9Y2Y8 225 aaPredicted RBP11.46□□□□□ -0.57
VPS50-201ENST00000251739 FANCMQ8IYD8 2048 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 NOTCH4Q99466 2003 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 A0A1B0GUA9 196 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 INO80B-WBP1J3KQ70 363 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 TEX28O15482 410 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 B4GALT5O43286 388 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 NEMFO60524 1076 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 SSBP05455 408 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS50-201ENST00000251739 URODP06132 367 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS50-201ENST00000251739 KLRC2P26717 231 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 GLUD2P49448 558 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 DSG1Q02413 1049 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
VPS50-201ENST00000251739 CCDC149Q6ZUS6 474 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 TMEM87AQ8NBN3 555 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
VPS50-201ENST00000251739 FAM193BQ96PV7 902 aaPredicted RBP11.45□□□□□ -0.58
VPS50-201ENST00000251739 POLR3FQ9H1D9 316 aaPredicted RBP11.45□□□□□ -0.58
VPS50-201ENST00000251739 TMEM60Q9H2L4 133 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 MAN1C1Q9NR34 630 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 LIMD1Q9UGP4 676 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 GIT1Q9Y2X7 761 aa11.45□□□□□ -0.58
VPS50-201ENST00000251739 OTOGLQ3ZCN5 2332 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 RCCD1A6NED2 376 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 PROB1E7EW31 1015 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 MARCH6O60337 910 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 ADH1AP07327 375 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 OR1G1P47890 313 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 GRIK3Q13003 919 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 FAM187BQ17R55 369 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 CWF19L1Q69YN2 538 aaKnown RBP11.44□□□□□ -0.58
VPS50-201ENST00000251739 SLC27A1Q6PCB7 646 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 CYP26C1Q6V0L0 522 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 PIGOQ8TEQ8 1089 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 HDAC7Q8WUI4 952 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 ZNF707Q96C28 371 aaPredicted RBP11.44□□□□□ -0.58
VPS50-201ENST00000251739 ACSF2Q96CM8 615 aaPredicted RBP11.44□□□□□ -0.58
VPS50-201ENST00000251739 PRIMPOLQ96LW4 560 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 IRF2BPLQ9H1B7 796 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 FAM86C1Q9NVL1 165 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 SSX2IPQ9Y2D8 614 aa11.44□□□□□ -0.58
VPS50-201ENST00000251739 PDCD11Q14690 1871 aaKnown RBP11.44□□□□□ -0.58
VPS50-201ENST00000251739 CITO14578 2027 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 FRYLO94915 3013 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 CEP250Q9BV73 2442 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 C2CD2LO14523 706 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 USO1O60763 962 aaKnown RBP11.43□□□□□ -0.58
VPS50-201ENST00000251739 GLUD1P00367 558 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 TXKP42681 527 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 FUT10Q6P4F1 479 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 LILRA6Q6PI73 481 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 CDR2LQ86X02 465 aaPredicted RBP11.43□□□□□ -0.58
VPS50-201ENST00000251739 GPR62Q9BZJ7 368 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 FZD8Q9H461 694 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 WDR6Q9NNW5 1121 aaKnown RBP11.43□□□□□ -0.58
VPS50-201ENST00000251739 TUFT1Q9NNX1 390 aa11.43□□□□□ -0.58
VPS50-201ENST00000251739 GPRC5CQ9NQ84 441 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms