RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 HEMGNQ9BXL5 484 aa19.49■□□□□ 0.71
PTPN12-201ENST00000248594 PYGMP11217 842 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 CHRNA3P32297 505 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 KDSRQ06136 332 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 RASSF3Q86WH2 238 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 ENDOVQ8N8Q3 282 aaKnown RBP19.48■□□□□ 0.71
PTPN12-201ENST00000248594 RFFLQ8WZ73 363 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 SEC14L1Q92503 715 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 IFT43Q96FT9 208 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 ANAPC4Q9UJX5 808 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 STXBP5LQ9Y2K9 1186 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 EXOC1LA0A1B0GW35 172 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 MEIS1O00470 390 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 TMCC1O94876 653 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 ITGA8P53708 1063 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 ACAP1Q15027 740 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 CCDC62Q6P9F0 684 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 ANKRD35Q8N283 1001 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 ARHGAP18Q8N392 663 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 GPR101Q96P66 508 aaPredicted RBP19.48■□□□□ 0.71
PTPN12-201ENST00000248594 CCDC77Q9BR77 488 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 VPS37BQ9H9H4 285 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 KDM3BQ7LBC6 1761 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 PODXLO00592 558 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 SLC37A4O43826 429 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 KCTD21Q4G0X4 260 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 APLFQ8IW19 511 aaPredicted RBP19.48■□□□□ 0.71
PTPN12-201ENST00000248594 RAD54LQ92698 747 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 AK8Q96MA6 479 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 KRT82Q9NSB4 513 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 DISP2A7MBM2 1401 aa19.48■□□□□ 0.71
PTPN12-201ENST00000248594 SFI1A8K8P3 1242 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 ITGA2BP08514 1039 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 EEF2P13639 858 aaKnown RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 PTGIRP43119 386 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 MTA1Q13330 715 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SPARCL1Q14515 664 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SGO2Q562F6 1265 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 C10orf76Q5T2E6 689 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SUSD4Q5VX71 490 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 TTC7BQ86TV6 843 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 RFWD2Q8NHY2 731 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 INPP5DQ92835 1189 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SERPINB12Q96P63 405 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SMYD3Q9H7B4 428 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SAP30BPQ9UHR5 308 aaKnown RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 ANAPC5Q9UJX4 755 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 C5P01031 1676 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 H3BRJ5 948 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 BOLA2-SMG1P6H3BVE0 249 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 TTLL1O95922 423 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 IL2RBP14784 551 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 CHRNB2P17787 502 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 RPA3P35244 121 aaPredicted RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 COILP38432 576 aaPredicted RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 PSMC4P43686 418 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 GATA6Q92908 595 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SIKE1Q9BRV8 207 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 MAGEF1Q9HAY2 307 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 TTC7AQ9ULT0 858 aaPredicted RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 ARHGAP42A6NI28 874 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 RNASEH1O60930 286 aaKnown RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 HARSP12081 509 aaKnown RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 COMTP21964 271 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 EIF6P56537 245 aaKnown RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 MKRN3Q13064 507 aaKnown RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 ECM1Q16610 540 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 PABPC1LQ4VXU2 614 aaKnown RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SYT2Q8N9I0 419 aaPredicted RBP19.47■□□□□ 0.71
PTPN12-201ENST00000248594 SYNCQ9H7C4 482 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 COG5Q9UP83 839 aa19.47■□□□□ 0.71
PTPN12-201ENST00000248594 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 AFDNP55196 1824 aaKnown RBP19.46■□□□□ 0.71
PTPN12-201ENST00000248594 PVALEFA0A1B0GWK0 134 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 CCDC22O60826 627 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 ENO1P06733 434 aaKnown RBP19.46■□□□□ 0.71
PTPN12-201ENST00000248594 RCAN1P53805 252 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 RNF207Q6ZRF8 634 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 MARK2Q7KZI7 788 aaKnown RBP19.46■□□□□ 0.71
PTPN12-201ENST00000248594 COA7Q96BR5 231 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 CCDC124Q96CT7 223 aaKnown RBP19.46■□□□□ 0.71
PTPN12-201ENST00000248594 THTPAQ9BU02 230 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 FAM192AQ9GZU8 254 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 TRABDQ9H4I3 376 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 EBF3Q9H4W6 596 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 BCAS3Q9H6U6 928 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 RIC1Q4ADV7 1423 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 MED1Q15648 1581 aaPredicted RBP19.46■□□□□ 0.71
PTPN12-201ENST00000248594 RBM47A0AV96 593 aaKnown RBP19.46■□□□□ 0.71
PTPN12-201ENST00000248594 USP17L8P0C7I0 530 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 DRAP1Q14919 205 aaPredicted RBP19.46■□□□□ 0.71
PTPN12-201ENST00000248594 GSTA5Q7RTV2 222 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 GRAMD1AQ96CP6 724 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 NDE1Q9NXR1 346 aa19.46■□□□□ 0.71
PTPN12-201ENST00000248594 GSC2O15499 205 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 GYS1P13807 737 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 CASP5P51878 434 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 ZYXQ15942 572 aaKnown RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 RINLQ6ZS11 566 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms