RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 SMTNP53814 917 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 STRN3Q13033 797 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 ZBTB33Q86T24 672 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 RAD54LQ92698 747 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 ACO2Q99798 780 aaKnown RBP23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 TARS2Q9BW92 718 aaKnown RBP23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 EMILIN2Q9BXX0 1053 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 CDT1Q9H211 546 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 CXCL16Q9H2A7 254 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 EPHX3Q9H6B9 360 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 FBXO2Q9UK22 296 aaPredicted RBP23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 TNFSF13BQ9Y275 285 aa23.22■■□□□ 1.31
HCFC1R1-201ENST00000248089 KRT18P05783 430 aaKnown RBP23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 THP07101 528 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 HARSP12081 509 aaKnown RBP23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 EPCAMP16422 314 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 OSTNP61366 133 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 TUSC3Q13454 348 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 MCM6Q14566 821 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 ARSHQ5FYA8 562 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 SYCE2Q6PIF2 218 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 TAS1R1Q7RTX1 841 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 SPIRE2Q8WWL2 714 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 EPSTI1Q96J88 318 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 REEP2Q9BRK0 252 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 ZSCAN16Q9H4T2 348 aaPredicted RBP23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 BLOC1S4Q9NUP1 217 aa23.21■■□□□ 1.31
HCFC1R1-201ENST00000248089 HOXB8P17481 243 aaPredicted RBP23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 GLUD2P49448 558 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 HSP90AA2PQ14568 343 aaPredicted RBP23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 TPRNQ4KMQ1 711 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 GLRA4Q5JXX5 417 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 CEP120Q8N960 986 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 HASPINQ8TF76 798 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 CLIC6Q96NY7 704 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 USP28Q96RU2 1077 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 PAAF1Q9BRP4 392 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 TCHPQ9BT92 498 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 CCDC94Q9BW85 323 aaPredicted RBP23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 LARSQ9P2J5 1176 aaKnown RBP23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 ANKFY1Q9P2R3 1169 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 ADAM28Q9UKQ2 775 aa23.2■■□□□ 1.3
HCFC1R1-201ENST00000248089 PDCD11Q14690 1871 aaKnown RBP23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 C19orf67A6NJJ6 358 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 SPDYE4A6NLX3 237 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 FAM13AO94988 1023 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 CNPP09543 421 aaKnown RBP23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 KLRC2P26717 231 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 FOXD4L5Q5VV16 416 aaPredicted RBP23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 KIAA1841Q6NSI8 718 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 FUT10Q6P4F1 479 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 USP49Q70CQ1 688 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 TMEM161BQ8NDZ6 487 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 FOXD4L4Q8WXT5 416 aaPredicted RBP23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 LARP4BQ92615 738 aaKnown RBP23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 B3GALT6Q96L58 329 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 KLHL5Q96PQ7 755 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 NTPCRQ9BSD7 190 aaKnown RBP23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 CCSER1Q9C0I3 900 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 S1PR5Q9H228 398 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 ZHX3Q9H4I2 956 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 KCNG1Q9UIX4 513 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 ODF2LQ9ULJ1 636 aa23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 SRPRBQ9Y5M8 271 aaKnown RBP23.19■■□□□ 1.3
HCFC1R1-201ENST00000248089 TADA2AO75478 443 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 MAPTP10636 758 aaKnown RBP23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 TXLNAP40222 546 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 YARSP54577 528 aaKnown RBP23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 CBX2Q14781 532 aaPredicted RBP23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 RARS2Q5T160 578 aaKnown RBP23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 MPZL3Q6UWV2 235 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 PPFIBP1Q86W92 1011 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 SUSD6Q92537 303 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 BICD1Q96G01 975 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 GPR62Q9BZJ7 368 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 PTPRHQ9HD43 1115 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 DZANK1Q9NVP4 752 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 CCDC39Q9UFE4 941 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 CDH22Q9UJ99 828 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 SSX2IPQ9Y2D8 614 aa23.18■■□□□ 1.3
HCFC1R1-201ENST00000248089 K7ENM7 598 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 TBCAO75347 108 aaKnown RBP23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 KIF4AO95239 1232 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 GRM5P41594 1212 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 MATR3P43243 847 aaKnown RBP eCLIP23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 CES5AQ6NT32 575 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 RNF168Q8IYW5 571 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 MYCT1Q8N699 235 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 C12orf76Q8N812 135 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 SLC22A17Q8WUG5 538 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 ZBTB45Q96K62 511 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 RPGRIP1Q96KN7 1286 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 PHF7Q9BWX1 381 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 C1QTNF1Q9BXJ1 281 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 PARVGQ9HBI0 331 aa23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 TOPORSQ9NS56 1045 aaPredicted RBP23.17■■□□□ 1.3
HCFC1R1-201ENST00000248089 C2orf16Q68DN1 1984 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 VWA8A3KMH1 1905 aa23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 SF3B1O75533 1304 aaKnown RBP eCLIP23.16■■□□□ 1.3
HCFC1R1-201ENST00000248089 H0YCG3 227 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms