RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 C9orf72Q96LT7 481 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 RILPQ96NA2 401 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 WNT8AQ9H1J5 351 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 ZMYND8Q9ULU4 1186 aaPredicted RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 PCDHA1Q9Y5I3 950 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 DOCK2Q92608 1830 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 NCANO14594 1321 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 TCRBV7S2A1N4TA0A589 114 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 USP17L10C9JJH3 530 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 CDH16O75309 829 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 NMT1P30419 496 aaKnown RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 SLC12A3P55017 1021 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 MTFR1Q15390 333 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 ZC2HC1CQ53FD0 456 aaPredicted RBP9.87□□□□□ -0.83
SRSF6-201ENST00000244020 MIGA2Q7L4E1 593 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 TPH2Q8IWU9 490 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 SLC20A1Q8WUM9 679 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 KCNMB3Q9NPA1 279 aa9.87□□□□□ -0.83
SRSF6-201ENST00000244020 COL5A2P05997 1499 aaPredicted RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 TTC4O95801 387 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 EPHB2P29323 1055 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SERPINB6P35237 376 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 PCYT1AP49585 367 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SH3BGRP55822 239 aaPredicted RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 IGBP1P78318 339 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 RNF43Q68DV7 783 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 VSTM1Q6UX27 236 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 PDCD7Q8N8D1 485 aaKnown RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 CNBD1Q8NA66 436 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 IKZF4Q9H2S9 585 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 MRPL46Q9H2W6 279 aaKnown RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 JMJD4Q9H9V9 463 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 CYP39A1Q9NYL5 469 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 STOML1Q9UBI4 398 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 PHTF1Q9UMS5 762 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ATP2A1O14983 1001 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ENTPD5O75356 428 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ZBTB48P10074 688 aaPredicted RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ITIH2P19823 946 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 PTDSS1P48651 473 aaKnown RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ITGA8P53708 1063 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 POLGP54098 1239 aaPredicted RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 C16orf86Q6ZW13 317 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 FAM178BQ8IXR5 827 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ZNF653Q96CK0 615 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SNF8Q96H20 258 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 RPS6KC1Q96S38 1066 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SETDB2Q96T68 719 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 NAALADL1Q9UQQ1 740 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 PLCH1Q4KWH8 1693 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 EXOC1LA0A1B0GW35 172 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 FAM47DPA6NHR8 397 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 NVLO15381 856 aaKnown RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 CBX6O95503 412 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 CA4P22748 312 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 PEX5P50542 639 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 RCN2Q14257 317 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SPARCL1Q14515 664 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ZNF804AQ7Z570 1209 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 KIAA0825Q8IV33 1275 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SLC30A5Q8TAD4 765 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 KIAA1683Q9H0B3 1180 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 PALMDQ9NP74 551 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 GTPBP10A4D1E9 387 aaKnown RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 FESP07332 822 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ATP6V1C1P21283 382 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 CHKAP35790 457 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 RFC5P40937 340 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SKIV2L2P42285 1042 aaKnown RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 RBM26Q5T8P6 1007 aaKnown RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ANO7Q6IWH7 933 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ASRGL1Q7L266 308 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 SYT2Q8N9I0 419 aaPredicted RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ZNF564Q8TBZ8 553 aaPredicted RBP9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ATG4AQ8WYN0 398 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 USP6NLQ92738 828 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 NUP85Q9BW27 656 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 TBC1D10AQ9BXI6 508 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ANO3Q9BYT9 981 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 ZFP69BQ9UJL9 534 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 C2CD2Q9Y426 696 aa9.86□□□□□ -0.83
SRSF6-201ENST00000244020 WDR91A4D1P6 747 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 SPDYE5A6NIY4 337 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 OAS1P00973 400 aaKnown RBP9.85□□□□□ -0.83
SRSF6-201ENST00000244020 TRAF1Q13077 416 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 PDCD2Q16342 344 aaPredicted RBP9.85□□□□□ -0.83
SRSF6-201ENST00000244020 HSP90AA5PQ58FG0 334 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 HP1BP3Q5SSJ5 553 aaPredicted RBP9.85□□□□□ -0.83
SRSF6-201ENST00000244020 MAP7D3Q8IWC1 876 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 FAM13CQ8NE31 585 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 GRK7Q8WTQ7 553 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 FGD4Q96M96 766 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 GPR101Q96P66 508 aaPredicted RBP9.85□□□□□ -0.83
SRSF6-201ENST00000244020 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.85□□□□□ -0.83
SRSF6-201ENST00000244020 ZBTB5O15062 677 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 TSPY1Q01534 308 aa9.85□□□□□ -0.83
SRSF6-201ENST00000244020 CDR2Q01850 454 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms