RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ADPGKQ9BRR6 497 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 IL23AQ9NPF7 189 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 CETN3O15182 167 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 ZNF18P17022 549 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 AKAP5P24588 427 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 FPGSQ05932 587 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 ENOX2Q16206 610 aaKnown RBP21.95■■□□□ 1.1
SNRPA-201ENST00000243563 SNRNP35Q16560 246 aaKnown RBP21.95■■□□□ 1.1
SNRPA-201ENST00000243563 APBB2Q92870 758 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 TRAIPQ9BWF2 469 aa21.95■■□□□ 1.1
SNRPA-201ENST00000243563 COL4A6Q14031 1691 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 CAPN15O75808 1086 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 CXCL8P10145 99 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 GRM5P41594 1212 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 MYBPC2Q14324 1141 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 TPD52L1Q16890 204 aaPredicted RBP21.94■■□□□ 1.1
SNRPA-201ENST00000243563 ECHDC2Q86YB7 292 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 CNOT6LQ96LI5 555 aaKnown RBP21.94■■□□□ 1.1
SNRPA-201ENST00000243563 CEP63Q96MT8 703 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 ANP32EQ9BTT0 268 aa21.94■■□□□ 1.1
SNRPA-201ENST00000243563 TRIM6Q9C030 488 aaPredicted RBP21.94■■□□□ 1.1
SNRPA-201ENST00000243563 A0A0U1RQF3 1178 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 CAVIN2O95810 425 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 RPL13P26373 211 aaKnown RBP21.93■■□□□ 1.1
SNRPA-201ENST00000243563 AGMOQ6ZNB7 445 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 FILIP1Q7Z7B0 1213 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 ZNF598Q86UK7 904 aaKnown RBP21.93■■□□□ 1.1
SNRPA-201ENST00000243563 FAM186BQ8IYM0 893 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 FTHL17Q9BXU8 183 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 THAP9Q9H5L6 903 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 FNDC1Q4ZHG4 1894 aaPredicted RBP21.93■■□□□ 1.1
SNRPA-201ENST00000243563 PTPRJQ12913 1337 aa21.93■■□□□ 1.1
SNRPA-201ENST00000243563 TDRD15B5MCY1 1934 aaKnown RBP21.93■■□□□ 1.1
SNRPA-201ENST00000243563 RECQL4O94761 1208 aa21.92■■□□□ 1.1
SNRPA-201ENST00000243563 AFF1P51825 1210 aaKnown RBP21.92■■□□□ 1.1
SNRPA-201ENST00000243563 DLG4P78352 724 aa21.92■■□□□ 1.1
SNRPA-201ENST00000243563 FAM189BP81408 668 aa21.92■■□□□ 1.1
SNRPA-201ENST00000243563 PPIGQ13427 754 aaKnown RBP eCLIP21.92■■□□□ 1.14e-9■■□□□ 11.9
SNRPA-201ENST00000243563 SLC10A6Q3KNW5 377 aa21.92■■□□□ 1.1
SNRPA-201ENST00000243563 C1orf220Q5T0J3 134 aa21.92■■□□□ 1.1
SNRPA-201ENST00000243563 ZNF365Q70YC5 407 aa21.92■■□□□ 1.1
SNRPA-201ENST00000243563 TMCO2Q7Z6W1 182 aaPredicted RBP21.92■■□□□ 1.1
SNRPA-201ENST00000243563 MRPL10Q7Z7H8 261 aaKnown RBP21.92■■□□□ 1.1
SNRPA-201ENST00000243563 KLK14Q9P0G3 267 aa21.92■■□□□ 1.1
SNRPA-201ENST00000243563 BECN2A8MW95 431 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 SLC16A3O15427 465 aaKnown RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 ZNF623O75123 536 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 PSMC2P35998 433 aaKnown RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 DEFB103AP81534 67 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 SPAG1Q07617 926 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 CYP24A1Q07973 514 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 SLC24A5Q71RS6 500 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 OTOP2Q7RTS6 562 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 BRSK2Q8IWQ3 736 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 CRIPAKQ8N1N5 446 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 RNF169Q8NCN4 708 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 MFSD14AQ96MC6 490 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.91■■□□□ 1.12e-7■■□□□ 11.5
SNRPA-201ENST00000243563 PDE11AQ9HCR9 933 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 TOPORSQ9NS56 1045 aaPredicted RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 RBAKQ9NYW8 714 aaPredicted RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 SMTNL1A8MU46 457 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 KCNJ18B7U540 433 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 KIAA0391O15091 583 aaKnown RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 LDHAP00338 332 aaKnown RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 CLTAP09496 248 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 KCNJ12Q14500 433 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 TMEM240Q5SV17 173 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 SCARA3Q6AZY7 606 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 APTXQ7Z2E3 356 aaKnown RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 POP1Q99575 1024 aaKnown RBP21.91■■□□□ 1.1
SNRPA-201ENST00000243563 MKNK1Q9BUB5 465 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 FRMD4BQ9Y2L6 1034 aa21.91■■□□□ 1.1
SNRPA-201ENST00000243563 ZNF233A6NK53 670 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 LACTBL1A8MY62 500 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 TRIM49P0CI25 452 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 TRIM49CP0CI26 452 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 GATMP50440 423 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 IKBKEQ14164 716 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 CCDC40Q4G0X9 1142 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 LMBRD2Q68DH5 695 aaPredicted RBP21.9■■□□□ 1.1
SNRPA-201ENST00000243563 CREBRFQ8IUR6 639 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 RPUSD2Q8IZ73 545 aaKnown RBP21.9■■□□□ 1.1
SNRPA-201ENST00000243563 FAM212AQ96EL1 285 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 SNX27Q96L92 541 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 ZFP42Q96MM3 310 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 ACAP3Q96P50 834 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 CXXC1Q9P0U4 656 aaPredicted RBP21.9■■□□□ 1.1
SNRPA-201ENST00000243563 PARP2Q9UGN5 583 aa21.9■■□□□ 1.1
SNRPA-201ENST00000243563 TTC26A0AVF1 554 aa21.89■■□□□ 1.09
SNRPA-201ENST00000243563 TULP1O00294 542 aaPredicted RBP21.89■■□□□ 1.09
SNRPA-201ENST00000243563 AP5Z1O43299 807 aa21.89■■□□□ 1.09
SNRPA-201ENST00000243563 PFKMP08237 780 aa21.89■■□□□ 1.09
SNRPA-201ENST00000243563 EPB41P11171 864 aaKnown RBP21.89■■□□□ 1.09
SNRPA-201ENST00000243563 FGFR1P11362 822 aa21.89■■□□□ 1.09
SNRPA-201ENST00000243563 ITGA4P13612 1032 aa21.89■■□□□ 1.09
SNRPA-201ENST00000243563 MAGEA10P43363 369 aaPredicted RBP21.89■■□□□ 1.09
SNRPA-201ENST00000243563 RAB27AP51159 221 aa21.89■■□□□ 1.09
SNRPA-201ENST00000243563 MARSP56192 900 aaKnown RBP21.89■■□□□ 1.09
SNRPA-201ENST00000243563 WDR5P61964 334 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms