RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 XIAPP98170 497 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 MAPK7Q13164 816 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PIGWQ7Z7B1 504 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 NEK8Q86SG6 692 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 ZBTB3Q9H5J0 574 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 STX18Q9P2W9 335 aaKnown RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 TEKT2Q9UIF3 430 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 CROTQ9UKG9 612 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PRPF3O43395 683 aaKnown RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 MAPK4P31152 587 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 STX3Q13277 289 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 MEA1Q16626 185 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 SLC45A4Q5BKX6 768 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 GPBP1Q86WP2 473 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 IFNL3Q8IZI9 196 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 TRPC4APQ8TEL6 797 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 CMTM5Q96DZ9 223 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 ZSCAN10Q96SZ4 725 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 ANGPTL3Q9Y5C1 460 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 CYTH3O43739 400 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 DDAH1O94760 285 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 ZNF24P17028 368 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 JAK1P23458 1154 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 CCR3P51677 355 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 NCKAP1LP55160 1127 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PRAMEP78395 509 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 TAS2R42Q7RTR8 314 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 TNIP2Q8NFZ5 429 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 MAP3K14Q99558 947 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 MTA3Q9BTC8 594 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 GPR108Q9NPR9 543 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PCMTD2Q9NV79 361 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 CNOT8Q9UFF9 292 aaKnown RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 KDM6AO15550 1401 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 DEFA1P59665 94 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 DEFA3P59666 94 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 KRR1Q13601 381 aaKnown RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PIDD1Q9HB75 910 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 GIN1Q9NXP7 522 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 PSMC3IPQ9P2W1 217 aaPredicted RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 RINT1Q6NUQ1 792 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TTC33Q6PID6 262 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-201ENST00000236192 CCDC103Q8IW40 242 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 DCUN1D5Q9BTE7 237 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
VAMP4-201ENST00000236192 GINM1Q9NU53 330 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TRIM64CA6NLI5 447 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 RIPK2O43353 540 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TRMUO75648 421 aaKnown RBP13.61□□□□□ -0.23
VAMP4-201ENST00000236192 DLGAP3O95886 979 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 CCDC130P13994 396 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ZNF280DQ6N043 979 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 INO80Q9ULG1 1556 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ARHGAP26Q9UNA1 814 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ITM2BQ9Y287 266 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TRPM2O94759 1503 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 SAMD9LQ8IVG5 1584 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
VAMP4-201ENST00000236192 OCRLQ01968 901 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 CLVS1Q8IUQ0 354 aaPredicted RBP13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TRPC7Q9HCX4 862 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TNKSO95271 1327 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 NEURL1BA8MQ27 555 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ARL4CP56559 192 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 RASA3Q14644 834 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 PACS1Q6VY07 963 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ACAD11Q709F0 780 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 UNC13DQ70J99 1090 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 OSBP2Q969R2 916 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 FADS3Q9Y5Q0 445 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ACEP12821 1306 aa13.61□□□□□ -0.23
VAMP4-201ENST00000236192 ABL1P00519 1130 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 IZUMO3Q5VZ72 239 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 C16orf89Q6UX73 402 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 ARHGAP27Q6ZUM4 889 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 ZFYVE19Q96K21 471 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 CLTCL1P53675 1640 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 ZNF12P17014 697 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 ITGADQ13349 1161 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 ZNF507Q8TCN5 953 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 OXER1Q8TDS5 423 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 RABL2AQ9UBK7 228 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-201ENST00000236192 PCDHA4Q9UN74 947 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 TDRKHQ9Y2W6 561 aaKnown RBP13.6□□□□□ -0.23
VAMP4-201ENST00000236192 IVNS1ABPQ9Y6Y0 642 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 PJA2O43164 708 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 NDUFB5O43674 189 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 UQCRBP14927 111 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 CD151P48509 253 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms