RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DDX42Q86XP3 938 aaKnown RBP eCLIP22.12■■□□□ 1.13
SNX3-201ENST00000230085 OR2W6PQ8NHA6 318 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 SYTL5Q8TDW5 730 aaPredicted RBP22.12■■□□□ 1.13
SNX3-201ENST00000230085 RFFLQ8WZ73 363 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 PABPC3Q9H361 631 aaKnown RBP22.12■■□□□ 1.13
SNX3-201ENST00000230085 ATP6V0A4Q9HBG4 840 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 TYW1Q9NV66 732 aaKnown RBP22.12■■□□□ 1.13
SNX3-201ENST00000230085 AMACRQ9UHK6 382 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 DDX3XO00571 662 aaKnown RBP eCLIP22.12■■□□□ 1.136e-33■■■■□ 21.4
SNX3-201ENST00000230085 SLC9A1P19634 815 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 RPL13P26373 211 aaKnown RBP22.12■■□□□ 1.13
SNX3-201ENST00000230085 ELF1P32519 619 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 FLT3P36888 993 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 RGS2P41220 211 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 GHRHRQ02643 423 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 UBE2SQ16763 222 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 ZNF792Q3KQV3 632 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 EPB41L4BQ9H329 900 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 CD248Q9HCU0 757 aa22.12■■□□□ 1.13
SNX3-201ENST00000230085 LCTP09848 1927 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 PLXNA1Q9UIW2 1896 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 CCT8L1PA6NM43 557 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 CCDC169A6NNP5 214 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 DDX3YO15523 660 aaKnown RBP22.11■■□□□ 1.13
SNX3-201ENST00000230085 TMOD1P28289 359 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 DNA2P51530 1060 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 FAM228AQ86W67 206 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 CCDC197Q8NCU1 140 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 FGD4Q96M96 766 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 ERP44Q9BS26 406 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 AP1M1Q9BXS5 423 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 MAP3K20Q9NYL2 800 aaKnown RBP22.11■■□□□ 1.13
SNX3-201ENST00000230085 SLC12A4Q9UP95 1085 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 KIAA1024Q9UPX6 916 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 RBBP6Q7Z6E9 1792 aaKnown RBP22.11■■□□□ 1.13
SNX3-201ENST00000230085 ZNF236Q9UL36 1845 aa22.11■■□□□ 1.13
SNX3-201ENST00000230085 ASTN1O14525 1302 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 CFAP73A6NFT4 308 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 E9PMD0 336 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 PIK3CDO00329 1044 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 TTI1O43156 1089 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 HOXC6P09630 235 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 HOXD13P35453 343 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 RNASE9P60153 205 aaKnown RBP22.1■■□□□ 1.13
SNX3-201ENST00000230085 ARID5AQ03989 594 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 CCL14Q16627 93 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 ODF2Q5BJF6 829 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 CTU1Q7Z7A3 348 aaKnown RBP22.1■■□□□ 1.13
SNX3-201ENST00000230085 NELFCDQ8IXH7 590 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 SYT2Q8N9I0 419 aaPredicted RBP22.1■■□□□ 1.13
SNX3-201ENST00000230085 GIMAP7Q8NHV1 300 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 RAET1EQ8TD07 263 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 CRYGNQ8WXF5 182 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 SLC35C1Q96A29 364 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 BORCS6Q96GS4 357 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 TAAR1Q96RJ0 339 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 MKNK1Q9BUB5 465 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 PTPN22Q9Y2R2 807 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 SOWAHBA6NEL2 793 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 ITGA4P13612 1032 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 GIT2Q14161 759 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 SAMD3Q8N6K7 520 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 ANKS4BQ8N8V4 417 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 ATXN2LQ8WWM7 1075 aaKnown RBP22.1■■□□□ 1.13
SNX3-201ENST00000230085 HVCN1Q96D96 273 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 MAML3Q96JK9 1138 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 APBA2Q99767 749 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 MAF1Q9H063 256 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 POLD4Q9HCU8 107 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 SLC5A4Q9NY91 659 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 FLRT1Q9NZU1 646 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 TPX2Q9ULW0 747 aaKnown RBP22.1■■□□□ 1.13
SNX3-201ENST00000230085 PTCH2Q9Y6C5 1203 aa22.1■■□□□ 1.13
SNX3-201ENST00000230085 GOLGA6L10A0A0M3HER8 536 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 AGTP01019 485 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 ACTN1P12814 892 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 EZRP15311 586 aaKnown RBP22.09■■□□□ 1.13
SNX3-201ENST00000230085 STAT1P42224 750 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 SPIRE1Q08AE8 756 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 IRF5Q13568 498 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 SPRED3Q2MJR0 410 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 CPLX4Q7Z7G2 160 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 GPIHBP1Q8IV16 184 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 TEX2Q8IWB9 1127 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 GPATCH11Q8N954 259 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 PARP2Q9UGN5 583 aa22.09■■□□□ 1.13
SNX3-201ENST00000230085 FRMPD4Q14CM0 1322 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 RFX1P22670 979 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 PRMT2P55345 433 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 LMNB2Q03252 620 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 TLDC1Q6P9B6 456 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 DAAM2Q86T65 1068 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 NEK9Q8TD19 979 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 CCHCR1Q8TD31 782 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 STMN4Q9H169 189 aaPredicted RBP22.08■■□□□ 1.13
SNX3-201ENST00000230085 CENPHQ9H3R5 247 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 OLFML3Q9NRN5 406 aa22.08■■□□□ 1.13
SNX3-201ENST00000230085 EIF3DO15371 548 aaKnown RBP eCLIP22.07■■□□□ 1.12
SNX3-201ENST00000230085 GGPS1O95749 300 aa22.07■■□□□ 1.12
SNX3-201ENST00000230085 ELNP15502 786 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms